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P80375

- RS10_THETH

UniProt

P80375 - RS10_THETH

Protein

30S ribosomal protein S10

Gene

rpsJ

Organism
Thermus thermophilus
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
  1. Functioni

    Involved in the binding of tRNA to the ribosomes.UniRule annotation

    GO - Molecular functioni

    1. structural constituent of ribosome Source: InterPro
    2. tRNA binding Source: UniProtKB-HAMAP

    GO - Biological processi

    1. translation Source: UniProtKB-HAMAP

    Keywords - Molecular functioni

    Ribonucleoprotein, Ribosomal protein

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    30S ribosomal protein S10UniRule annotation
    Gene namesi
    Name:rpsJUniRule annotation
    Synonyms:rps10UniRule annotation
    OrganismiThermus thermophilus
    Taxonomic identifieri274 [NCBI]
    Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus

    Subcellular locationi

    GO - Cellular componenti

    1. ribosome Source: UniProtKB-KW

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Initiator methioninei1 – 11RemovedBy similarity
    Chaini2 – 10510430S ribosomal protein S10PRO_0000146621Add
    BLAST

    Structurei

    Secondary structure

    1
    105
    Legend: HelixTurnBeta strand
    Show more details
    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Beta strandi4 – 118
    Helixi13 – 164
    Turni18 – 203
    Beta strandi21 – 233
    Helixi24 – 263
    Beta strandi28 – 325
    Beta strandi46 – 494
    Beta strandi51 – 544
    Beta strandi61 – 644
    Beta strandi71 – 766
    Turni79 – 879
    Beta strandi92 – 987

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    EntryMethodResolution (Å)ChainPositionsPDBsum
    1TWTmodel-M2-105[»]
    4BYBX-ray3.35J1-105[»]
    ProteinModelPortaliP80375.
    SMRiP80375. Positions 3-100.
    ModBaseiSearch...
    MobiDBiSearch...

    Family & Domainsi

    Sequence similaritiesi

    Belongs to the ribosomal protein S10P family.UniRule annotation

    Family and domain databases

    Gene3Di3.30.70.600. 1 hit.
    HAMAPiMF_00508. Ribosomal_S10.
    InterProiIPR001848. Ribosomal_S10.
    IPR018268. Ribosomal_S10_CS.
    IPR027486. Ribosomal_S10_dom.
    [Graphical view]
    PANTHERiPTHR11700. PTHR11700. 1 hit.
    PfamiPF00338. Ribosomal_S10. 1 hit.
    [Graphical view]
    PRINTSiPR00971. RIBOSOMALS10.
    SUPFAMiSSF54999. SSF54999. 1 hit.
    TIGRFAMsiTIGR01049. rpsJ_bact. 1 hit.
    PROSITEiPS00361. RIBOSOMAL_S10. 1 hit.
    [Graphical view]

    Sequencei

    Sequence statusi: Complete.

    Sequence processingi: The displayed sequence is further processed into a mature form.

    P80375-1 [UniParc]FASTAAdd to Basket

    « Hide

    MPKIRIKLRG FDHKTLDASA QKIVEAARRS GAQVSGPIPL PTRVRRFTVI    50
    RGPFKHKDSR EHFELRTHNR LVDIINPNRK TIEQLMTLDL PTGVEIEIKT 100
    VGGGR 105
    Length:105
    Mass (Da):11,930
    Last modified:January 23, 2007 - v3
    Checksum:iE769CB9EFE2C4EF4
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z46265 Genomic DNA. Translation: CAA86407.1.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    Z46265 Genomic DNA. Translation: CAA86407.1 .

    3D structure databases

    Select the link destinations:
    PDBe
    RCSB PDB
    PDBj
    Links Updated
    Entry Method Resolution (Å) Chain Positions PDBsum
    1TWT model - M 2-105 [» ]
    4BYB X-ray 3.35 J 1-105 [» ]
    ProteinModelPortali P80375.
    SMRi P80375. Positions 3-100.
    ModBasei Search...
    MobiDBi Search...

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Family and domain databases

    Gene3Di 3.30.70.600. 1 hit.
    HAMAPi MF_00508. Ribosomal_S10.
    InterProi IPR001848. Ribosomal_S10.
    IPR018268. Ribosomal_S10_CS.
    IPR027486. Ribosomal_S10_dom.
    [Graphical view ]
    PANTHERi PTHR11700. PTHR11700. 1 hit.
    Pfami PF00338. Ribosomal_S10. 1 hit.
    [Graphical view ]
    PRINTSi PR00971. RIBOSOMALS10.
    SUPFAMi SSF54999. SSF54999. 1 hit.
    TIGRFAMsi TIGR01049. rpsJ_bact. 1 hit.
    PROSITEi PS00361. RIBOSOMAL_S10. 1 hit.
    [Graphical view ]
    ProtoNeti Search...

    Publicationsi

    1. "The primary structure of the S10 operon from Thermus thermophilus."
      Serganov A.A., Avliyakulov N.K., Rack A.V., Vysotskaya V.S., Garber M.B.
      Submitted (DEC-1995) to the EMBL/GenBank/DDBJ databases
      Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
      Strain: VK1.

    Entry informationi

    Entry nameiRS10_THETH
    AccessioniPrimary (citable) accession number: P80375
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: February 1, 1995
    Last sequence update: January 23, 2007
    Last modified: October 1, 2014
    This is version 89 of the entry and version 3 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    3D-structure

    Documents

    1. PDB cross-references
      Index of Protein Data Bank (PDB) cross-references
    2. Ribosomal proteins
      Ribosomal proteins families and list of entries
    3. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3