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P80372

- RS3_THET8

UniProt

P80372 - RS3_THET8

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Protein

30S ribosomal protein S3

Gene
rpsC, rps3, TTHA1686
Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed - Annotation score: 4 out of 5 - Experimental evidence at protein leveli

Functioni

Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.UniRule annotation

GO - Molecular functioni

  1. mRNA binding Source: UniProtKB-HAMAP
  2. rRNA binding Source: UniProtKB-HAMAP
  3. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciTTHE300852:GH8R-1725-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S3
Gene namesi
Name:rpsC
Synonyms:rps3
Ordered Locus Names:TTHA1686
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000532: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. small ribosomal subunit Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed1 Publication
Chaini2 – 23923830S ribosomal protein S3UniRule annotationPRO_0000130223Add
BLAST

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14.8 Publications

Protein-protein interaction databases

STRINGi300852.TTHA1686.

Structurei

Secondary structure

1
239
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Turni7 – 137
Beta strandi14 – 163
Beta strandi19 – 213
Turni26 – 283
Helixi29 – 4416
Turni45 – 506
Beta strandi52 – 554
Beta strandi56 – 583
Beta strandi59 – 624
Beta strandi64 – 663
Beta strandi67 – 715
Helixi73 – 753
Beta strandi79 – 824
Helixi83 – 9412
Beta strandi97 – 993
Beta strandi102 – 1054
Helixi109 – 1113
Helixi113 – 12513
Helixi130 – 14314
Beta strandi147 – 1537
Turni157 – 1593
Beta strandi164 – 1674
Beta strandi169 – 1713
Beta strandi175 – 1773
Helixi178 – 1803
Beta strandi182 – 1876
Beta strandi189 – 1913
Beta strandi192 – 1943
Beta strandi195 – 1973
Beta strandi198 – 2036

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1FJGX-ray3.00C1-239[»]
1GIXX-ray5.50F1-239[»]
1HNWX-ray3.40C1-239[»]
1HNXX-ray3.40C1-239[»]
1HNZX-ray3.30C1-239[»]
1HR0X-ray3.20C1-239[»]
1I94X-ray3.20C2-239[»]
1I95X-ray4.50C2-239[»]
1I96X-ray4.20C2-239[»]
1I97X-ray4.50C2-239[»]
1IBKX-ray3.31C1-239[»]
1IBLX-ray3.11C1-239[»]
1IBMX-ray3.31C1-239[»]
1J5EX-ray3.05C1-239[»]
1L1Umodel-C1-207[»]
1ML5electron microscopy14.00F1-239[»]
1N32X-ray3.00C1-239[»]
1N33X-ray3.35C1-239[»]
1N34X-ray3.80C1-239[»]
1N36X-ray3.65C1-239[»]
1PNSX-ray8.70C2-207[»]
1PNXX-ray9.50C2-207[»]
1XMOX-ray3.25C1-239[»]
1XMQX-ray3.00C1-239[»]
1XNQX-ray3.05C1-239[»]
1XNRX-ray3.10C1-239[»]
1YL4X-ray5.50F1-239[»]
2B64X-ray5.90C1-239[»]
2B9MX-ray6.76C1-239[»]
2B9OX-ray6.46C1-239[»]
2E5LX-ray3.30C2-239[»]
2F4VX-ray3.80C1-239[»]
2HGIX-ray5.00F1-239[»]
2HGPX-ray5.50F1-239[»]
2HGRX-ray4.51F1-239[»]
2HHHX-ray3.35C1-239[»]
2J00X-ray2.80C2-239[»]
2J02X-ray2.80C2-239[»]
2UU9X-ray3.10C2-239[»]
2UUAX-ray2.90C2-239[»]
2UUBX-ray2.80C2-239[»]
2UUCX-ray3.10C2-239[»]
2UXBX-ray3.10C2-239[»]
2UXCX-ray2.90C2-239[»]
2UXDX-ray3.20C2-239[»]
2V46X-ray3.50C2-239[»]
2V48X-ray3.50C2-239[»]
2VQEX-ray2.50C1-239[»]
2VQFX-ray2.90C1-239[»]
2WDGX-ray3.30C1-239[»]
2WDHX-ray3.30C1-239[»]
2WDKX-ray3.50C1-239[»]
2WDMX-ray3.50C1-239[»]
2WH1X-ray3.45C1-239[»]
2WH3X-ray3.45C1-239[»]
2WRIX-ray3.60C1-239[»]
2WRKX-ray3.60C1-239[»]
2WRNX-ray3.60C1-239[»]
2WRQX-ray3.60C1-239[»]
2X9RX-ray3.10C1-239[»]
2X9TX-ray3.10C1-239[»]
2XFZX-ray3.20C1-239[»]
2XG1X-ray3.20C1-239[»]
2XQDX-ray3.10C1-239[»]
2XSYelectron microscopy7.80C1-239[»]
2XUYelectron microscopy7.60C1-239[»]
2Y0UX-ray3.10C1-239[»]
2Y0WX-ray3.10C1-239[»]
2Y0YX-ray3.10C1-239[»]
2Y10X-ray3.10C1-239[»]
2Y12X-ray3.10C1-239[»]
2Y14X-ray3.10C1-239[»]
2Y16X-ray3.10C1-239[»]
2Y18X-ray3.10C1-239[»]
2ZM6X-ray3.30C2-239[»]
3FICelectron microscopy6.40C2-208[»]
3HUWX-ray3.10C1-239[»]
3HUYX-ray3.10C1-239[»]
3I8GX-ray3.10F1-239[»]
3I8HX-ray3.10F1-239[»]
3I9BX-ray3.50F1-239[»]
3I9DX-ray3.50F1-239[»]
3KIQX-ray3.30c1-239[»]
3KISX-ray3.30c1-239[»]
3KIUX-ray3.60c1-239[»]
3KIXX-ray3.60c1-239[»]
3KNHX-ray3.00C1-239[»]
3KNJX-ray3.15C1-239[»]
3KNLX-ray3.45C1-239[»]
3KNNX-ray3.45C1-239[»]
3OGEX-ray3.00C1-239[»]
3OGYX-ray3.00C1-239[»]
3OHCX-ray3.00C1-239[»]
3OHDX-ray3.00C1-239[»]
3OHYX-ray3.00C1-239[»]
3OI0X-ray3.00C1-239[»]
3OI2X-ray3.10C1-239[»]
3OI4X-ray3.10C1-239[»]
3OTOX-ray3.69C1-239[»]
3T1HX-ray3.11C1-239[»]
3T1YX-ray2.80C1-239[»]
3TVFX-ray3.10F1-239[»]
3TVGX-ray3.10F1-239[»]
3UXSX-ray3.20C1-239[»]
3UXTX-ray3.20C1-239[»]
3UYDX-ray3.00F1-239[»]
3UYFX-ray3.00F1-239[»]
3UZ3X-ray3.30F1-239[»]
3UZ4X-ray3.30F1-239[»]
3UZ6X-ray3.00F1-239[»]
3UZ7X-ray3.00F1-239[»]
3UZGX-ray3.30F1-239[»]
3UZIX-ray3.30F1-239[»]
3UZLX-ray3.30F1-239[»]
3UZMX-ray3.30F1-239[»]
3V22X-ray3.00C1-239[»]
3V24X-ray3.00C1-239[»]
3V26X-ray3.10C1-239[»]
3V28X-ray3.10C1-239[»]
3V2CX-ray2.70C1-239[»]
3V2EX-ray2.70C1-239[»]
3V6UX-ray3.90C1-239[»]
3V6VX-ray3.90C1-239[»]
3ZN7X-ray3.10C1-239[»]
3ZNDX-ray3.10C1-239[»]
3ZVOX-ray3.80C1-239[»]
4ABRX-ray3.10C1-239[»]
4AQYX-ray3.50C1-239[»]
4B3MX-ray2.90C1-239[»]
4B3RX-ray3.00C1-239[»]
4B3SX-ray3.15C1-239[»]
4B3TX-ray3.00C1-239[»]
4B8FX-ray3.70C1-239[»]
4B8HX-ray3.70C1-239[»]
4BYBX-ray3.35C1-239[»]
4BYDX-ray3.35C1-239[»]
4CR1X-ray2.95C1-239[»]
4DH9X-ray3.20C1-239[»]
4DHBX-ray3.20C1-239[»]
4DR1X-ray3.60C1-239[»]
4DR2X-ray3.25C1-239[»]
4DR3X-ray3.35C1-239[»]
4DR4X-ray3.97C1-239[»]
4DR5X-ray3.45C1-239[»]
4DR6X-ray3.30C1-239[»]
4DR7X-ray3.75C1-239[»]
4DUYX-ray3.39C1-239[»]
4DUZX-ray3.65C1-239[»]
4DV0X-ray3.85C1-239[»]
4DV1X-ray3.85C1-239[»]
4DV2X-ray3.65C1-239[»]
4DV3X-ray3.55C1-239[»]
4DV4X-ray3.65C1-239[»]
4DV5X-ray3.68C1-239[»]
4DV6X-ray3.30C1-239[»]
4DV7X-ray3.29C1-239[»]
4EJ9X-ray3.52C1-239[»]
4EJAX-ray3.52C1-239[»]
4G5KX-ray3.30F1-239[»]
4G5MX-ray3.30F1-239[»]
4G5TX-ray3.10F1-239[»]
4G5VX-ray3.10F1-239[»]
4GKJX-ray3.30C2-207[»]
4GKKX-ray3.20C2-207[»]
4JI0X-ray3.49C1-239[»]
4JI1X-ray3.14C1-239[»]
4JI2X-ray3.64C1-239[»]
4JI3X-ray3.35C1-239[»]
4JI4X-ray3.69C1-239[»]
4JI5X-ray3.85C1-239[»]
4JI6X-ray3.55C1-239[»]
4JI7X-ray3.50C1-239[»]
4JI8X-ray3.74C1-239[»]
4JUWX-ray2.86C2-207[»]
4JV5X-ray3.16C2-207[»]
4JYAX-ray3.10C2-207[»]
4K0KX-ray3.40C2-208[»]
4K0LX-ray3.30C2-207[»]
4K0PX-ray3.30C2-207[»]
4KHPX-ray3.10C2-207[»]
4NVUX-ray3.00C1-239[»]
4NVWX-ray3.00C1-239[»]
4NVYX-ray3.10C1-239[»]
4NW0X-ray3.10C1-239[»]
4NXMX-ray3.65C1-239[»]
4NXNX-ray3.54C1-239[»]
4OX9X-ray3.80C1-239[»]
ProteinModelPortaliP80372.
SMRiP80372. Positions 2-207.

Miscellaneous databases

EvolutionaryTraceiP80372.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini39 – 10769KH type-2Add
BLAST

Sequence similaritiesi

Contains 1 KH type-2 domain.

Phylogenomic databases

eggNOGiCOG0092.
HOGENOMiHOG000210610.
KOiK02982.
OMAiIARAEWY.
OrthoDBiEOG6K13X3.
PhylomeDBiP80372.

Family and domain databases

Gene3Di3.30.1140.32. 1 hit.
3.30.300.20. 1 hit.
HAMAPiMF_01309_B. Ribosomal_S3_B.
InterProiIPR004087. KH_dom.
IPR015946. KH_dom-like_a/b.
IPR004044. KH_dom_type_2.
IPR009019. KH_prok-type.
IPR005704. Ribosomal_S3_bac.
IPR001351. Ribosomal_S3_C.
IPR018280. Ribosomal_S3_CS.
[Graphical view]
PfamiPF07650. KH_2. 1 hit.
PF00189. Ribosomal_S3_C. 1 hit.
[Graphical view]
SMARTiSM00322. KH. 1 hit.
[Graphical view]
SUPFAMiSSF54814. SSF54814. 1 hit.
SSF54821. SSF54821. 1 hit.
TIGRFAMsiTIGR01009. rpsC_bact. 1 hit.
PROSITEiPS50823. KH_TYPE_2. 1 hit.
PS00548. RIBOSOMAL_S3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P80372-1 [UniParc]FASTAAdd to Basket

« Hide

MGNKIHPIGF RLGITRDWES RWYAGKKQYR HLLLEDQRIR GLLEKELYSA    50
GLARVDIERA ADNVAVTVHV AKPGVVIGRG GERIRVLREE LAKLTGKNVA 100
LNVQEVQNPN LSAPLVAQRV AEQIERRFAV RRAIKQAVQR VMESGAKGAK 150
VIVSGRIGGA EQARTEWAAQ GRVPLHTLRA NIDYGFALAR TTYGVLGVKA 200
YIFLGEVIGG QKPKARPELP KAEERPRRRR PAVRVKKEE 239
Length:239
Mass (Da):26,701
Last modified:January 23, 2007 - v3
Checksum:iAD585A1D53AC7F04
GO

Mass spectrometryi

Molecular mass is 26570 Da from positions 2 - 239. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP008226 Genomic DNA. Translation: BAD71509.1.
RefSeqiYP_144952.1. NC_006461.1.

Genome annotation databases

EnsemblBacteriaiBAD71509; BAD71509; BAD71509.
GeneIDi3168725.
KEGGittj:TTHA1686.
PATRICi23958327. VBITheThe93045_1656.

Cross-referencesi

Web resourcesi

T.thermophilus ribosome structure and function

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
AP008226 Genomic DNA. Translation: BAD71509.1 .
RefSeqi YP_144952.1. NC_006461.1.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1FJG X-ray 3.00 C 1-239 [» ]
1GIX X-ray 5.50 F 1-239 [» ]
1HNW X-ray 3.40 C 1-239 [» ]
1HNX X-ray 3.40 C 1-239 [» ]
1HNZ X-ray 3.30 C 1-239 [» ]
1HR0 X-ray 3.20 C 1-239 [» ]
1I94 X-ray 3.20 C 2-239 [» ]
1I95 X-ray 4.50 C 2-239 [» ]
1I96 X-ray 4.20 C 2-239 [» ]
1I97 X-ray 4.50 C 2-239 [» ]
1IBK X-ray 3.31 C 1-239 [» ]
1IBL X-ray 3.11 C 1-239 [» ]
1IBM X-ray 3.31 C 1-239 [» ]
1J5E X-ray 3.05 C 1-239 [» ]
1L1U model - C 1-207 [» ]
1ML5 electron microscopy 14.00 F 1-239 [» ]
1N32 X-ray 3.00 C 1-239 [» ]
1N33 X-ray 3.35 C 1-239 [» ]
1N34 X-ray 3.80 C 1-239 [» ]
1N36 X-ray 3.65 C 1-239 [» ]
1PNS X-ray 8.70 C 2-207 [» ]
1PNX X-ray 9.50 C 2-207 [» ]
1XMO X-ray 3.25 C 1-239 [» ]
1XMQ X-ray 3.00 C 1-239 [» ]
1XNQ X-ray 3.05 C 1-239 [» ]
1XNR X-ray 3.10 C 1-239 [» ]
1YL4 X-ray 5.50 F 1-239 [» ]
2B64 X-ray 5.90 C 1-239 [» ]
2B9M X-ray 6.76 C 1-239 [» ]
2B9O X-ray 6.46 C 1-239 [» ]
2E5L X-ray 3.30 C 2-239 [» ]
2F4V X-ray 3.80 C 1-239 [» ]
2HGI X-ray 5.00 F 1-239 [» ]
2HGP X-ray 5.50 F 1-239 [» ]
2HGR X-ray 4.51 F 1-239 [» ]
2HHH X-ray 3.35 C 1-239 [» ]
2J00 X-ray 2.80 C 2-239 [» ]
2J02 X-ray 2.80 C 2-239 [» ]
2UU9 X-ray 3.10 C 2-239 [» ]
2UUA X-ray 2.90 C 2-239 [» ]
2UUB X-ray 2.80 C 2-239 [» ]
2UUC X-ray 3.10 C 2-239 [» ]
2UXB X-ray 3.10 C 2-239 [» ]
2UXC X-ray 2.90 C 2-239 [» ]
2UXD X-ray 3.20 C 2-239 [» ]
2V46 X-ray 3.50 C 2-239 [» ]
2V48 X-ray 3.50 C 2-239 [» ]
2VQE X-ray 2.50 C 1-239 [» ]
2VQF X-ray 2.90 C 1-239 [» ]
2WDG X-ray 3.30 C 1-239 [» ]
2WDH X-ray 3.30 C 1-239 [» ]
2WDK X-ray 3.50 C 1-239 [» ]
2WDM X-ray 3.50 C 1-239 [» ]
2WH1 X-ray 3.45 C 1-239 [» ]
2WH3 X-ray 3.45 C 1-239 [» ]
2WRI X-ray 3.60 C 1-239 [» ]
2WRK X-ray 3.60 C 1-239 [» ]
2WRN X-ray 3.60 C 1-239 [» ]
2WRQ X-ray 3.60 C 1-239 [» ]
2X9R X-ray 3.10 C 1-239 [» ]
2X9T X-ray 3.10 C 1-239 [» ]
2XFZ X-ray 3.20 C 1-239 [» ]
2XG1 X-ray 3.20 C 1-239 [» ]
2XQD X-ray 3.10 C 1-239 [» ]
2XSY electron microscopy 7.80 C 1-239 [» ]
2XUY electron microscopy 7.60 C 1-239 [» ]
2Y0U X-ray 3.10 C 1-239 [» ]
2Y0W X-ray 3.10 C 1-239 [» ]
2Y0Y X-ray 3.10 C 1-239 [» ]
2Y10 X-ray 3.10 C 1-239 [» ]
2Y12 X-ray 3.10 C 1-239 [» ]
2Y14 X-ray 3.10 C 1-239 [» ]
2Y16 X-ray 3.10 C 1-239 [» ]
2Y18 X-ray 3.10 C 1-239 [» ]
2ZM6 X-ray 3.30 C 2-239 [» ]
3FIC electron microscopy 6.40 C 2-208 [» ]
3HUW X-ray 3.10 C 1-239 [» ]
3HUY X-ray 3.10 C 1-239 [» ]
3I8G X-ray 3.10 F 1-239 [» ]
3I8H X-ray 3.10 F 1-239 [» ]
3I9B X-ray 3.50 F 1-239 [» ]
3I9D X-ray 3.50 F 1-239 [» ]
3KIQ X-ray 3.30 c 1-239 [» ]
3KIS X-ray 3.30 c 1-239 [» ]
3KIU X-ray 3.60 c 1-239 [» ]
3KIX X-ray 3.60 c 1-239 [» ]
3KNH X-ray 3.00 C 1-239 [» ]
3KNJ X-ray 3.15 C 1-239 [» ]
3KNL X-ray 3.45 C 1-239 [» ]
3KNN X-ray 3.45 C 1-239 [» ]
3OGE X-ray 3.00 C 1-239 [» ]
3OGY X-ray 3.00 C 1-239 [» ]
3OHC X-ray 3.00 C 1-239 [» ]
3OHD X-ray 3.00 C 1-239 [» ]
3OHY X-ray 3.00 C 1-239 [» ]
3OI0 X-ray 3.00 C 1-239 [» ]
3OI2 X-ray 3.10 C 1-239 [» ]
3OI4 X-ray 3.10 C 1-239 [» ]
3OTO X-ray 3.69 C 1-239 [» ]
3T1H X-ray 3.11 C 1-239 [» ]
3T1Y X-ray 2.80 C 1-239 [» ]
3TVF X-ray 3.10 F 1-239 [» ]
3TVG X-ray 3.10 F 1-239 [» ]
3UXS X-ray 3.20 C 1-239 [» ]
3UXT X-ray 3.20 C 1-239 [» ]
3UYD X-ray 3.00 F 1-239 [» ]
3UYF X-ray 3.00 F 1-239 [» ]
3UZ3 X-ray 3.30 F 1-239 [» ]
3UZ4 X-ray 3.30 F 1-239 [» ]
3UZ6 X-ray 3.00 F 1-239 [» ]
3UZ7 X-ray 3.00 F 1-239 [» ]
3UZG X-ray 3.30 F 1-239 [» ]
3UZI X-ray 3.30 F 1-239 [» ]
3UZL X-ray 3.30 F 1-239 [» ]
3UZM X-ray 3.30 F 1-239 [» ]
3V22 X-ray 3.00 C 1-239 [» ]
3V24 X-ray 3.00 C 1-239 [» ]
3V26 X-ray 3.10 C 1-239 [» ]
3V28 X-ray 3.10 C 1-239 [» ]
3V2C X-ray 2.70 C 1-239 [» ]
3V2E X-ray 2.70 C 1-239 [» ]
3V6U X-ray 3.90 C 1-239 [» ]
3V6V X-ray 3.90 C 1-239 [» ]
3ZN7 X-ray 3.10 C 1-239 [» ]
3ZND X-ray 3.10 C 1-239 [» ]
3ZVO X-ray 3.80 C 1-239 [» ]
4ABR X-ray 3.10 C 1-239 [» ]
4AQY X-ray 3.50 C 1-239 [» ]
4B3M X-ray 2.90 C 1-239 [» ]
4B3R X-ray 3.00 C 1-239 [» ]
4B3S X-ray 3.15 C 1-239 [» ]
4B3T X-ray 3.00 C 1-239 [» ]
4B8F X-ray 3.70 C 1-239 [» ]
4B8H X-ray 3.70 C 1-239 [» ]
4BYB X-ray 3.35 C 1-239 [» ]
4BYD X-ray 3.35 C 1-239 [» ]
4CR1 X-ray 2.95 C 1-239 [» ]
4DH9 X-ray 3.20 C 1-239 [» ]
4DHB X-ray 3.20 C 1-239 [» ]
4DR1 X-ray 3.60 C 1-239 [» ]
4DR2 X-ray 3.25 C 1-239 [» ]
4DR3 X-ray 3.35 C 1-239 [» ]
4DR4 X-ray 3.97 C 1-239 [» ]
4DR5 X-ray 3.45 C 1-239 [» ]
4DR6 X-ray 3.30 C 1-239 [» ]
4DR7 X-ray 3.75 C 1-239 [» ]
4DUY X-ray 3.39 C 1-239 [» ]
4DUZ X-ray 3.65 C 1-239 [» ]
4DV0 X-ray 3.85 C 1-239 [» ]
4DV1 X-ray 3.85 C 1-239 [» ]
4DV2 X-ray 3.65 C 1-239 [» ]
4DV3 X-ray 3.55 C 1-239 [» ]
4DV4 X-ray 3.65 C 1-239 [» ]
4DV5 X-ray 3.68 C 1-239 [» ]
4DV6 X-ray 3.30 C 1-239 [» ]
4DV7 X-ray 3.29 C 1-239 [» ]
4EJ9 X-ray 3.52 C 1-239 [» ]
4EJA X-ray 3.52 C 1-239 [» ]
4G5K X-ray 3.30 F 1-239 [» ]
4G5M X-ray 3.30 F 1-239 [» ]
4G5T X-ray 3.10 F 1-239 [» ]
4G5V X-ray 3.10 F 1-239 [» ]
4GKJ X-ray 3.30 C 2-207 [» ]
4GKK X-ray 3.20 C 2-207 [» ]
4JI0 X-ray 3.49 C 1-239 [» ]
4JI1 X-ray 3.14 C 1-239 [» ]
4JI2 X-ray 3.64 C 1-239 [» ]
4JI3 X-ray 3.35 C 1-239 [» ]
4JI4 X-ray 3.69 C 1-239 [» ]
4JI5 X-ray 3.85 C 1-239 [» ]
4JI6 X-ray 3.55 C 1-239 [» ]
4JI7 X-ray 3.50 C 1-239 [» ]
4JI8 X-ray 3.74 C 1-239 [» ]
4JUW X-ray 2.86 C 2-207 [» ]
4JV5 X-ray 3.16 C 2-207 [» ]
4JYA X-ray 3.10 C 2-207 [» ]
4K0K X-ray 3.40 C 2-208 [» ]
4K0L X-ray 3.30 C 2-207 [» ]
4K0P X-ray 3.30 C 2-207 [» ]
4KHP X-ray 3.10 C 2-207 [» ]
4NVU X-ray 3.00 C 1-239 [» ]
4NVW X-ray 3.00 C 1-239 [» ]
4NVY X-ray 3.10 C 1-239 [» ]
4NW0 X-ray 3.10 C 1-239 [» ]
4NXM X-ray 3.65 C 1-239 [» ]
4NXN X-ray 3.54 C 1-239 [» ]
4OX9 X-ray 3.80 C 1-239 [» ]
ProteinModelPortali P80372.
SMRi P80372. Positions 2-207.
ModBasei Search...
MobiDBi Search...

Protein-protein interaction databases

STRINGi 300852.TTHA1686.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

EnsemblBacteriai BAD71509 ; BAD71509 ; BAD71509 .
GeneIDi 3168725.
KEGGi ttj:TTHA1686.
PATRICi 23958327. VBITheThe93045_1656.

Phylogenomic databases

eggNOGi COG0092.
HOGENOMi HOG000210610.
KOi K02982.
OMAi IARAEWY.
OrthoDBi EOG6K13X3.
PhylomeDBi P80372.

Enzyme and pathway databases

BioCyci TTHE300852:GH8R-1725-MONOMER.

Miscellaneous databases

EvolutionaryTracei P80372.

Family and domain databases

Gene3Di 3.30.1140.32. 1 hit.
3.30.300.20. 1 hit.
HAMAPi MF_01309_B. Ribosomal_S3_B.
InterProi IPR004087. KH_dom.
IPR015946. KH_dom-like_a/b.
IPR004044. KH_dom_type_2.
IPR009019. KH_prok-type.
IPR005704. Ribosomal_S3_bac.
IPR001351. Ribosomal_S3_C.
IPR018280. Ribosomal_S3_CS.
[Graphical view ]
Pfami PF07650. KH_2. 1 hit.
PF00189. Ribosomal_S3_C. 1 hit.
[Graphical view ]
SMARTi SM00322. KH. 1 hit.
[Graphical view ]
SUPFAMi SSF54814. SSF54814. 1 hit.
SSF54821. SSF54821. 1 hit.
TIGRFAMsi TIGR01009. rpsC_bact. 1 hit.
PROSITEi PS50823. KH_TYPE_2. 1 hit.
PS00548. RIBOSOMAL_S3. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of Thermus thermophilus HB8."
    Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y., Shibata T., Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S.
    Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB8 / ATCC 27634 / DSM 579.
  2. "Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus."
    Tsiboli P., Herfurth E., Choli T.
    Eur. J. Biochem. 226:169-177(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 2-37.
  3. "Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry."
    Suh M.-J., Hamburg D.M., Gregory S.T., Dahlberg A.E., Limbach P.A.
    Proteomics 5:4818-4831(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: MASS SPECTROMETRY.
  4. Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.
  5. "Structure of functionally activated small ribosomal subunit at 3.3 A resolution."
    Schluenzen F., Tocilj A., Zarivach R., Harms J., Gluehmann M., Janell D., Bashan A., Bartels H., Agmon I., Franceschi F., Yonath A.
    Cell 102:615-623(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
  6. "The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit."
    Brodersen D.E., Clemons W.M. Jr., Carter A.P., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
    Cell 103:1143-1154(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
  7. "Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics."
    Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
    Nature 407:340-348(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.0 ANGSTROMS) OF THE 30S SUBUNIT.
  8. "The path of messenger RNA through the ribosome."
    Yusupova G.Z., Yusupov M.M., Cate J.H.D., Noller H.F.
    Cell 106:233-241(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (5.0 ANGSTROMS) OF THE RIBOSOME.
  9. "Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3."
    Pioletti M., Schluenzen F., Harms J., Zarivach R., Gluehmann M., Avila H., Bashan A., Bartels H., Auerbach T., Jacobi C., Hartsch T., Yonath A., Franceschi F.
    EMBO J. 20:1829-1839(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
  10. "Crystal structure of an initiation factor bound to the 30S ribosomal subunit."
    Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Hartsch T., Wimberly B.T., Ramakrishnan V.
    Science 291:498-501(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
  11. Cited for: X-RAY CRYSTALLOGRAPHY (5.5 ANGSTROMS) OF THE RIBOSOME.
  12. "Recognition of cognate transfer RNA by the 30S ribosomal subunit."
    Ogle J.M., Brodersen D.E., Clemons W.M. Jr., Tarry M.J., Carter A.P., Ramakrishnan V.
    Science 292:897-902(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.11 ANGSTROMS) OF THE 30S SUBUNIT.
  13. "Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA."
    Brodersen D.E., Clemons W.M. Jr., Carter A.P., Wimberly B.T., Ramakrishnan V.
    J. Mol. Biol. 316:725-768(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.

Entry informationi

Entry nameiRS3_THET8
AccessioniPrimary (citable) accession number: P80372
Secondary accession number(s): Q5SHP4, Q9ACK0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: January 23, 2007
Last modified: July 9, 2014
This is version 127 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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