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Protein

30S ribosomal protein S3

Gene

rpsC

Organism
Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Status
Reviewed-Annotation score: Annotation score: 4 out of 5-Experimental evidence at protein leveli

Functioni

Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation.

GO - Molecular functioni

  1. mRNA binding Source: UniProtKB-HAMAP
  2. rRNA binding Source: UniProtKB-HAMAP
  3. structural constituent of ribosome Source: InterPro

GO - Biological processi

  1. translation Source: UniProtKB-HAMAP
Complete GO annotation...

Keywords - Molecular functioni

Ribonucleoprotein, Ribosomal protein

Keywords - Ligandi

RNA-binding, rRNA-binding

Enzyme and pathway databases

BioCyciTTHE300852:GH8R-1725-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
30S ribosomal protein S3
Gene namesi
Name:rpsC
Synonyms:rps3
Ordered Locus Names:TTHA1686
OrganismiThermus thermophilus (strain HB8 / ATCC 27634 / DSM 579)
Taxonomic identifieri300852 [NCBI]
Taxonomic lineageiBacteriaDeinococcus-ThermusDeinococciThermalesThermaceaeThermus
ProteomesiUP000000532: Chromosome

Subcellular locationi

GO - Cellular componenti

  1. small ribosomal subunit Source: InterPro
Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed1 Publication
Chaini2 – 23923830S ribosomal protein S3PRO_0000130223Add
BLAST

Interactioni

Subunit structurei

Part of the 30S ribosomal subunit. Forms a tight complex with proteins S10 and S14.

Protein-protein interaction databases

STRINGi300852.TTHA1686.

Structurei

Secondary structure

1
239
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Turni7 – 137Combined sources
Beta strandi14 – 163Combined sources
Beta strandi19 – 213Combined sources
Turni26 – 283Combined sources
Helixi29 – 4416Combined sources
Turni45 – 506Combined sources
Beta strandi52 – 554Combined sources
Beta strandi59 – 624Combined sources
Beta strandi67 – 715Combined sources
Helixi73 – 753Combined sources
Beta strandi79 – 824Combined sources
Helixi83 – 9412Combined sources
Beta strandi95 – 973Combined sources
Beta strandi102 – 1054Combined sources
Helixi109 – 1113Combined sources
Helixi113 – 12513Combined sources
Helixi130 – 14314Combined sources
Beta strandi147 – 1537Combined sources
Turni157 – 1593Combined sources
Beta strandi169 – 1713Combined sources
Beta strandi175 – 1773Combined sources
Helixi178 – 1803Combined sources
Beta strandi182 – 1876Combined sources
Beta strandi188 – 1903Combined sources
Beta strandi195 – 1973Combined sources
Beta strandi198 – 2036Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1FJGX-ray3.00C1-239[»]
1HNWX-ray3.40C1-239[»]
1HNXX-ray3.40C1-239[»]
1HNZX-ray3.30C1-239[»]
1HR0X-ray3.20C1-239[»]
1I94X-ray3.20C2-239[»]
1I95X-ray4.50C2-239[»]
1I96X-ray4.20C2-239[»]
1I97X-ray4.50C2-239[»]
1IBKX-ray3.31C1-239[»]
1IBLX-ray3.11C1-239[»]
1IBMX-ray3.31C1-239[»]
1J5EX-ray3.05C1-239[»]
1L1Umodel-C1-207[»]
1ML5electron microscopy14.00F1-239[»]
1N32X-ray3.00C1-239[»]
1N33X-ray3.35C1-239[»]
1N34X-ray3.80C1-239[»]
1N36X-ray3.65C1-239[»]
1VVJX-ray3.44C1-239[»]
1VY4X-ray2.60C1-239[»]
1VY5X-ray2.55C1-239[»]
1VY6X-ray2.90C1-239[»]
1VY7X-ray2.80C1-239[»]
1XMOX-ray3.25C1-239[»]
1XMQX-ray3.00C1-239[»]
1XNQX-ray3.05C1-239[»]
1XNRX-ray3.10C1-239[»]
2E5LX-ray3.30C2-239[»]
2F4VX-ray3.80C1-239[»]
2HHHX-ray3.35C1-239[»]
2UU9X-ray3.10C2-239[»]
2UUAX-ray2.90C2-239[»]
2UUBX-ray2.80C2-239[»]
2UUCX-ray3.10C2-239[»]
2UXBX-ray3.10C2-239[»]
2UXCX-ray2.90C2-239[»]
2UXDX-ray3.20C2-239[»]
2VQEX-ray2.50C1-239[»]
2VQFX-ray2.90C1-239[»]
2ZM6X-ray3.30C2-239[»]
3OTOX-ray3.69C1-239[»]
3T1HX-ray3.11C1-239[»]
3T1YX-ray2.80C1-239[»]
4AQYX-ray3.50C1-239[»]
4B3MX-ray2.90C1-239[»]
4B3RX-ray3.00C1-239[»]
4B3SX-ray3.15C1-239[»]
4B3TX-ray3.00C1-239[»]
4DR1X-ray3.60C1-239[»]
4DR2X-ray3.25C1-239[»]
4DR3X-ray3.35C1-239[»]
4DR4X-ray3.97C1-239[»]
4DR5X-ray3.45C1-239[»]
4DR6X-ray3.30C1-239[»]
4DR7X-ray3.75C1-239[»]
4DUYX-ray3.39C1-239[»]
4DUZX-ray3.65C1-239[»]
4DV0X-ray3.85C1-239[»]
4DV1X-ray3.85C1-239[»]
4DV2X-ray3.65C1-239[»]
4DV3X-ray3.55C1-239[»]
4DV4X-ray3.65C1-239[»]
4DV5X-ray3.68C1-239[»]
4DV6X-ray3.30C1-239[»]
4DV7X-ray3.29C1-239[»]
4GKJX-ray3.30C2-207[»]
4GKKX-ray3.20C2-207[»]
4JI0X-ray3.49C1-239[»]
4JI1X-ray3.14C1-239[»]
4JI2X-ray3.64C1-239[»]
4JI3X-ray3.35C1-239[»]
4JI4X-ray3.69C1-239[»]
4JI5X-ray3.85C1-239[»]
4JI6X-ray3.55C1-239[»]
4JI7X-ray3.50C1-239[»]
4JI8X-ray3.74C1-239[»]
4JV5X-ray3.16C2-207[»]
4JYAX-ray3.10C2-207[»]
4K0KX-ray3.40C2-208[»]
4KHPX-ray3.10C2-207[»]
4L47X-ray3.22C1-239[»]
4L71X-ray3.90C1-239[»]
4LELX-ray3.90C1-239[»]
4LF4X-ray3.34C1-239[»]
4LF5X-ray3.75C1-239[»]
4LF6X-ray3.31C1-239[»]
4LF7X-ray3.15C1-239[»]
4LF8X-ray3.15C1-239[»]
4LF9X-ray3.28C1-239[»]
4LFAX-ray3.65C1-239[»]
4LFBX-ray3.01C1-239[»]
4LFCX-ray3.60C1-239[»]
4LFZX-ray3.92C1-239[»]
4LNTX-ray2.94C1-239[»]
4LSKX-ray3.48C1-239[»]
4LT8X-ray3.14C1-239[»]
4NXMX-ray3.65C1-239[»]
4NXNX-ray3.54C1-239[»]
4OX9X-ray3.80C1-239[»]
4P6FX-ray3.60C1-239[»]
4P70X-ray3.68C1-239[»]
4V42X-ray5.50F1-239[»]
4V49X-ray8.70C2-207[»]
4V4AX-ray9.50C2-207[»]
4V4PX-ray5.50F1-239[»]
4V4RX-ray5.90C1-239[»]
4V4SX-ray6.76C1-239[»]
4V4TX-ray6.46C1-239[»]
4V4XX-ray5.00F1-239[»]
4V4YX-ray5.50F1-239[»]
4V4ZX-ray4.51F1-239[»]
4V51X-ray2.80C2-239[»]
4V5AX-ray3.50C2-239[»]
4V5CX-ray3.30C1-239[»]
4V5DX-ray3.50C1-239[»]
4V5EX-ray3.45C1-239[»]
4V5FX-ray3.60C1-239[»]
4V5GX-ray3.60C1-239[»]
4V5JX-ray3.10C1-239[»]
4V5KX-ray3.20C1-239[»]
4V5LX-ray3.10C1-239[»]
4V5Melectron microscopy7.80C1-239[»]
4V5Nelectron microscopy7.60C1-239[»]
4V5PX-ray3.10C1-239[»]
4V5QX-ray3.10C1-239[»]
4V5RX-ray3.10C1-239[»]
4V5SX-ray3.10C1-239[»]
4V68electron microscopy6.40C2-208[»]
4V6AX-ray3.10C1-239[»]
4V6FX-ray3.10F1-239[»]
4V6GX-ray3.50F1-239[»]
4V7JX-ray3.30c1-239[»]
4V7KX-ray3.60c1-239[»]
4V7LX-ray3.15C1-239[»]
4V7MX-ray3.45C1-239[»]
4V7WX-ray3.00C1-239[»]
4V7XX-ray3.00C1-239[»]
4V7YX-ray3.00C1-239[»]
4V7ZX-ray3.10C1-239[»]
4V87X-ray3.10F1-239[»]
4V8AX-ray3.20C1-239[»]
4V8BX-ray3.00F1-239[»]
4V8CX-ray3.30F1-239[»]
4V8DX-ray3.00F1-239[»]
4V8EX-ray3.30F1-239[»]
4V8FX-ray3.30F1-239[»]
4V8GX-ray3.00C1-239[»]
4V8HX-ray3.10C1-239[»]
4V8IX-ray2.70C1-239[»]
4V8JX-ray3.90C1-239[»]
4V8NX-ray3.10C1-239[»]
4V8OX-ray3.80C1-239[»]
4V8QX-ray3.10C1-239[»]
4V8UX-ray3.70C1-239[»]
4V8XX-ray3.35C1-239[»]
4V90X-ray2.95C1-239[»]
4V95X-ray3.20C1-239[»]
4V97X-ray3.52C1-239[»]
4V9AX-ray3.30F1-239[»]
4V9BX-ray3.10F1-239[»]
4V9HX-ray2.86C2-207[»]
4V9IX-ray3.30C2-207[»]
4V9RX-ray3.00C1-239[»]
4V9SX-ray3.10C1-239[»]
4W2EX-ray2.90c1-239[»]
4W2FX-ray2.40C1-239[»]
4W2GX-ray2.55C1-239[»]
4W2HX-ray2.70C1-239[»]
4W2IX-ray2.70C1-239[»]
ProteinModelPortaliP80372.
SMRiP80372. Positions 2-207.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP80372.

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini39 – 10769KH type-2Add
BLAST

Sequence similaritiesi

Belongs to the ribosomal protein S3P family.Curated
Contains 1 KH type-2 domain.Curated

Phylogenomic databases

eggNOGiCOG0092.
HOGENOMiHOG000210610.
KOiK02982.
OMAiMGQKTNP.
OrthoDBiEOG6K13X3.
PhylomeDBiP80372.

Family and domain databases

Gene3Di3.30.1140.32. 1 hit.
3.30.300.20. 1 hit.
HAMAPiMF_01309_B. Ribosomal_S3_B.
InterProiIPR004087. KH_dom.
IPR015946. KH_dom-like_a/b.
IPR004044. KH_dom_type_2.
IPR009019. KH_prok-type.
IPR005704. Ribosomal_S3_bac.
IPR001351. Ribosomal_S3_C.
IPR018280. Ribosomal_S3_CS.
[Graphical view]
PfamiPF07650. KH_2. 1 hit.
PF00189. Ribosomal_S3_C. 1 hit.
[Graphical view]
SMARTiSM00322. KH. 1 hit.
[Graphical view]
SUPFAMiSSF54814. SSF54814. 1 hit.
SSF54821. SSF54821. 1 hit.
TIGRFAMsiTIGR01009. rpsC_bact. 1 hit.
PROSITEiPS50823. KH_TYPE_2. 1 hit.
PS00548. RIBOSOMAL_S3. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P80372-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGNKIHPIGF RLGITRDWES RWYAGKKQYR HLLLEDQRIR GLLEKELYSA
60 70 80 90 100
GLARVDIERA ADNVAVTVHV AKPGVVIGRG GERIRVLREE LAKLTGKNVA
110 120 130 140 150
LNVQEVQNPN LSAPLVAQRV AEQIERRFAV RRAIKQAVQR VMESGAKGAK
160 170 180 190 200
VIVSGRIGGA EQARTEWAAQ GRVPLHTLRA NIDYGFALAR TTYGVLGVKA
210 220 230
YIFLGEVIGG QKPKARPELP KAEERPRRRR PAVRVKKEE
Length:239
Mass (Da):26,701
Last modified:January 23, 2007 - v3
Checksum:iAD585A1D53AC7F04
GO

Mass spectrometryi

Molecular mass is 26570 Da from positions 2 - 239. Determined by MALDI. 1 Publication

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA. Translation: BAD71509.1.
RefSeqiYP_144952.1. NC_006461.1.

Genome annotation databases

EnsemblBacteriaiBAD71509; BAD71509; BAD71509.
GeneIDi3168725.
KEGGittj:TTHA1686.
PATRICi23958327. VBITheThe93045_1656.

Cross-referencesi

Web resourcesi

T.thermophilus ribosome structure and function

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
AP008226 Genomic DNA. Translation: BAD71509.1.
RefSeqiYP_144952.1. NC_006461.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1FJGX-ray3.00C1-239[»]
1HNWX-ray3.40C1-239[»]
1HNXX-ray3.40C1-239[»]
1HNZX-ray3.30C1-239[»]
1HR0X-ray3.20C1-239[»]
1I94X-ray3.20C2-239[»]
1I95X-ray4.50C2-239[»]
1I96X-ray4.20C2-239[»]
1I97X-ray4.50C2-239[»]
1IBKX-ray3.31C1-239[»]
1IBLX-ray3.11C1-239[»]
1IBMX-ray3.31C1-239[»]
1J5EX-ray3.05C1-239[»]
1L1Umodel-C1-207[»]
1ML5electron microscopy14.00F1-239[»]
1N32X-ray3.00C1-239[»]
1N33X-ray3.35C1-239[»]
1N34X-ray3.80C1-239[»]
1N36X-ray3.65C1-239[»]
1VVJX-ray3.44C1-239[»]
1VY4X-ray2.60C1-239[»]
1VY5X-ray2.55C1-239[»]
1VY6X-ray2.90C1-239[»]
1VY7X-ray2.80C1-239[»]
1XMOX-ray3.25C1-239[»]
1XMQX-ray3.00C1-239[»]
1XNQX-ray3.05C1-239[»]
1XNRX-ray3.10C1-239[»]
2E5LX-ray3.30C2-239[»]
2F4VX-ray3.80C1-239[»]
2HHHX-ray3.35C1-239[»]
2UU9X-ray3.10C2-239[»]
2UUAX-ray2.90C2-239[»]
2UUBX-ray2.80C2-239[»]
2UUCX-ray3.10C2-239[»]
2UXBX-ray3.10C2-239[»]
2UXCX-ray2.90C2-239[»]
2UXDX-ray3.20C2-239[»]
2VQEX-ray2.50C1-239[»]
2VQFX-ray2.90C1-239[»]
2ZM6X-ray3.30C2-239[»]
3OTOX-ray3.69C1-239[»]
3T1HX-ray3.11C1-239[»]
3T1YX-ray2.80C1-239[»]
4AQYX-ray3.50C1-239[»]
4B3MX-ray2.90C1-239[»]
4B3RX-ray3.00C1-239[»]
4B3SX-ray3.15C1-239[»]
4B3TX-ray3.00C1-239[»]
4DR1X-ray3.60C1-239[»]
4DR2X-ray3.25C1-239[»]
4DR3X-ray3.35C1-239[»]
4DR4X-ray3.97C1-239[»]
4DR5X-ray3.45C1-239[»]
4DR6X-ray3.30C1-239[»]
4DR7X-ray3.75C1-239[»]
4DUYX-ray3.39C1-239[»]
4DUZX-ray3.65C1-239[»]
4DV0X-ray3.85C1-239[»]
4DV1X-ray3.85C1-239[»]
4DV2X-ray3.65C1-239[»]
4DV3X-ray3.55C1-239[»]
4DV4X-ray3.65C1-239[»]
4DV5X-ray3.68C1-239[»]
4DV6X-ray3.30C1-239[»]
4DV7X-ray3.29C1-239[»]
4GKJX-ray3.30C2-207[»]
4GKKX-ray3.20C2-207[»]
4JI0X-ray3.49C1-239[»]
4JI1X-ray3.14C1-239[»]
4JI2X-ray3.64C1-239[»]
4JI3X-ray3.35C1-239[»]
4JI4X-ray3.69C1-239[»]
4JI5X-ray3.85C1-239[»]
4JI6X-ray3.55C1-239[»]
4JI7X-ray3.50C1-239[»]
4JI8X-ray3.74C1-239[»]
4JV5X-ray3.16C2-207[»]
4JYAX-ray3.10C2-207[»]
4K0KX-ray3.40C2-208[»]
4KHPX-ray3.10C2-207[»]
4L47X-ray3.22C1-239[»]
4L71X-ray3.90C1-239[»]
4LELX-ray3.90C1-239[»]
4LF4X-ray3.34C1-239[»]
4LF5X-ray3.75C1-239[»]
4LF6X-ray3.31C1-239[»]
4LF7X-ray3.15C1-239[»]
4LF8X-ray3.15C1-239[»]
4LF9X-ray3.28C1-239[»]
4LFAX-ray3.65C1-239[»]
4LFBX-ray3.01C1-239[»]
4LFCX-ray3.60C1-239[»]
4LFZX-ray3.92C1-239[»]
4LNTX-ray2.94C1-239[»]
4LSKX-ray3.48C1-239[»]
4LT8X-ray3.14C1-239[»]
4NXMX-ray3.65C1-239[»]
4NXNX-ray3.54C1-239[»]
4OX9X-ray3.80C1-239[»]
4P6FX-ray3.60C1-239[»]
4P70X-ray3.68C1-239[»]
4V42X-ray5.50F1-239[»]
4V49X-ray8.70C2-207[»]
4V4AX-ray9.50C2-207[»]
4V4PX-ray5.50F1-239[»]
4V4RX-ray5.90C1-239[»]
4V4SX-ray6.76C1-239[»]
4V4TX-ray6.46C1-239[»]
4V4XX-ray5.00F1-239[»]
4V4YX-ray5.50F1-239[»]
4V4ZX-ray4.51F1-239[»]
4V51X-ray2.80C2-239[»]
4V5AX-ray3.50C2-239[»]
4V5CX-ray3.30C1-239[»]
4V5DX-ray3.50C1-239[»]
4V5EX-ray3.45C1-239[»]
4V5FX-ray3.60C1-239[»]
4V5GX-ray3.60C1-239[»]
4V5JX-ray3.10C1-239[»]
4V5KX-ray3.20C1-239[»]
4V5LX-ray3.10C1-239[»]
4V5Melectron microscopy7.80C1-239[»]
4V5Nelectron microscopy7.60C1-239[»]
4V5PX-ray3.10C1-239[»]
4V5QX-ray3.10C1-239[»]
4V5RX-ray3.10C1-239[»]
4V5SX-ray3.10C1-239[»]
4V68electron microscopy6.40C2-208[»]
4V6AX-ray3.10C1-239[»]
4V6FX-ray3.10F1-239[»]
4V6GX-ray3.50F1-239[»]
4V7JX-ray3.30c1-239[»]
4V7KX-ray3.60c1-239[»]
4V7LX-ray3.15C1-239[»]
4V7MX-ray3.45C1-239[»]
4V7WX-ray3.00C1-239[»]
4V7XX-ray3.00C1-239[»]
4V7YX-ray3.00C1-239[»]
4V7ZX-ray3.10C1-239[»]
4V87X-ray3.10F1-239[»]
4V8AX-ray3.20C1-239[»]
4V8BX-ray3.00F1-239[»]
4V8CX-ray3.30F1-239[»]
4V8DX-ray3.00F1-239[»]
4V8EX-ray3.30F1-239[»]
4V8FX-ray3.30F1-239[»]
4V8GX-ray3.00C1-239[»]
4V8HX-ray3.10C1-239[»]
4V8IX-ray2.70C1-239[»]
4V8JX-ray3.90C1-239[»]
4V8NX-ray3.10C1-239[»]
4V8OX-ray3.80C1-239[»]
4V8QX-ray3.10C1-239[»]
4V8UX-ray3.70C1-239[»]
4V8XX-ray3.35C1-239[»]
4V90X-ray2.95C1-239[»]
4V95X-ray3.20C1-239[»]
4V97X-ray3.52C1-239[»]
4V9AX-ray3.30F1-239[»]
4V9BX-ray3.10F1-239[»]
4V9HX-ray2.86C2-207[»]
4V9IX-ray3.30C2-207[»]
4V9RX-ray3.00C1-239[»]
4V9SX-ray3.10C1-239[»]
4W2EX-ray2.90c1-239[»]
4W2FX-ray2.40C1-239[»]
4W2GX-ray2.55C1-239[»]
4W2HX-ray2.70C1-239[»]
4W2IX-ray2.70C1-239[»]
ProteinModelPortaliP80372.
SMRiP80372. Positions 2-207.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi300852.TTHA1686.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAD71509; BAD71509; BAD71509.
GeneIDi3168725.
KEGGittj:TTHA1686.
PATRICi23958327. VBITheThe93045_1656.

Phylogenomic databases

eggNOGiCOG0092.
HOGENOMiHOG000210610.
KOiK02982.
OMAiMGQKTNP.
OrthoDBiEOG6K13X3.
PhylomeDBiP80372.

Enzyme and pathway databases

BioCyciTTHE300852:GH8R-1725-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP80372.

Family and domain databases

Gene3Di3.30.1140.32. 1 hit.
3.30.300.20. 1 hit.
HAMAPiMF_01309_B. Ribosomal_S3_B.
InterProiIPR004087. KH_dom.
IPR015946. KH_dom-like_a/b.
IPR004044. KH_dom_type_2.
IPR009019. KH_prok-type.
IPR005704. Ribosomal_S3_bac.
IPR001351. Ribosomal_S3_C.
IPR018280. Ribosomal_S3_CS.
[Graphical view]
PfamiPF07650. KH_2. 1 hit.
PF00189. Ribosomal_S3_C. 1 hit.
[Graphical view]
SMARTiSM00322. KH. 1 hit.
[Graphical view]
SUPFAMiSSF54814. SSF54814. 1 hit.
SSF54821. SSF54821. 1 hit.
TIGRFAMsiTIGR01009. rpsC_bact. 1 hit.
PROSITEiPS50823. KH_TYPE_2. 1 hit.
PS00548. RIBOSOMAL_S3. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Complete genome sequence of Thermus thermophilus HB8."
    Masui R., Kurokawa K., Nakagawa N., Tokunaga F., Koyama Y., Shibata T., Oshima T., Yokoyama S., Yasunaga T., Kuramitsu S.
    Submitted (NOV-2004) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: HB8 / ATCC 27634 / DSM 579.
  2. "Purification and characterization of the 30S ribosomal proteins from the bacterium Thermus thermophilus."
    Tsiboli P., Herfurth E., Choli T.
    Eur. J. Biochem. 226:169-177(1994) [PubMed] [Europe PMC] [Abstract]
    Cited for: PROTEIN SEQUENCE OF 2-37.
  3. "Extending ribosomal protein identifications to unsequenced bacterial strains using matrix-assisted laser desorption/ionization mass spectrometry."
    Suh M.-J., Hamburg D.M., Gregory S.T., Dahlberg A.E., Limbach P.A.
    Proteomics 5:4818-4831(2005) [PubMed] [Europe PMC] [Abstract]
    Cited for: MASS SPECTROMETRY.
  4. Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.
  5. "Structure of functionally activated small ribosomal subunit at 3.3 A resolution."
    Schluenzen F., Tocilj A., Zarivach R., Harms J., Gluehmann M., Janell D., Bashan A., Bartels H., Agmon I., Franceschi F., Yonath A.
    Cell 102:615-623(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
  6. "The structural basis for the action of the antibiotics tetracycline, pactamycin, and hygromycin B on the 30S ribosomal subunit."
    Brodersen D.E., Clemons W.M. Jr., Carter A.P., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
    Cell 103:1143-1154(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.3 ANGSTROMS) OF THE 30S SUBUNIT.
  7. "Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics."
    Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Wimberly B.T., Ramakrishnan V.
    Nature 407:340-348(2000) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.0 ANGSTROMS) OF THE 30S SUBUNIT.
  8. "The path of messenger RNA through the ribosome."
    Yusupova G.Z., Yusupov M.M., Cate J.H.D., Noller H.F.
    Cell 106:233-241(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (5.0 ANGSTROMS) OF THE RIBOSOME.
  9. "Crystal structures of complexes of the small ribosomal subunit with tetracycline, edeine and IF3."
    Pioletti M., Schluenzen F., Harms J., Zarivach R., Gluehmann M., Avila H., Bashan A., Bartels H., Auerbach T., Jacobi C., Hartsch T., Yonath A., Franceschi F.
    EMBO J. 20:1829-1839(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
  10. "Crystal structure of an initiation factor bound to the 30S ribosomal subunit."
    Carter A.P., Clemons W.M. Jr., Brodersen D.E., Morgan-Warren R.J., Hartsch T., Wimberly B.T., Ramakrishnan V.
    Science 291:498-501(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.2 ANGSTROMS) OF THE 30S SUBUNIT.
  11. Cited for: X-RAY CRYSTALLOGRAPHY (5.5 ANGSTROMS) OF THE RIBOSOME.
  12. "Recognition of cognate transfer RNA by the 30S ribosomal subunit."
    Ogle J.M., Brodersen D.E., Clemons W.M. Jr., Tarry M.J., Carter A.P., Ramakrishnan V.
    Science 292:897-902(2001) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.11 ANGSTROMS) OF THE 30S SUBUNIT.
  13. "Crystal structure of the 30S ribosomal subunit from Thermus thermophilus: structure of the proteins and their interactions with 16S RNA."
    Brodersen D.E., Clemons W.M. Jr., Carter A.P., Wimberly B.T., Ramakrishnan V.
    J. Mol. Biol. 316:725-768(2002) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (3.05 ANGSTROMS) OF THE 30S SUBUNIT.

Entry informationi

Entry nameiRS3_THET8
AccessioniPrimary (citable) accession number: P80372
Secondary accession number(s): Q5SHP4, Q9ACK0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: February 1, 1995
Last sequence update: January 23, 2007
Last modified: March 4, 2015
This is version 133 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into Uniref entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.