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Protein
Submitted name:

Chondroitin sulfate proteoglycan core protein

Gene
N/A
Organism
Gallus gallus (Chicken)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Names & Taxonomyi

Protein namesi
Submitted name:
Chondroitin sulfate proteoglycan core proteinImported
OrganismiGallus gallus (Chicken)Imported
Taxonomic identifieri9031 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiArchelosauriaArchosauriaDinosauriaSaurischiaTheropodaCoelurosauriaAvesNeognathaeGalloanseraeGalliformesPhasianidaePhasianinaeGallus

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2020Sequence analysisAdd
BLAST
Chaini21 – 21092089Sequence analysisPRO_5004161312Add
BLAST

Keywords - PTMi

Disulfide bondSAAS annotation

Proteomic databases

PaxDbiP79787.

Interactioni

Protein-protein interaction databases

STRINGi9031.ENSGALP00000037775.

Structurei

3D structure databases

ProteinModelPortaliP79787.
SMRiP79787. Positions 1897-2020.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini34 – 143110Ig-like (immunoglobulin-like)InterPro annotationAdd
BLAST
Domaini149 – 24496LinkInterPro annotationAdd
BLAST
Domaini250 – 34798LinkInterPro annotationAdd
BLAST
Domaini520 – 61596LinkInterPro annotationAdd
BLAST
Domaini621 – 71797LinkInterPro annotationAdd
BLAST
Domaini1855 – 189137EGF-likeInterPro annotationAdd
BLAST
Domaini1904 – 2018115C-type lectinInterPro annotationAdd
BLAST
Domaini2022 – 208261Sushi (CCP/SCR)InterPro annotationAdd
BLAST

Sequence similaritiesi

Contains C-type lectin domain.SAAS annotation

Keywords - Domaini

EGF-like domainSAAS annotation, RepeatSAAS annotation, SignalSequence analysis, SushiSAAS annotation

Phylogenomic databases

eggNOGiENOG410IJP2. Eukaryota.
ENOG410XRES. LUCA.
HOVERGENiHBG007982.
KOiK06792.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
3.10.100.10. 5 hits.
InterProiIPR001304. C-type_lectin.
IPR016186. C-type_lectin-like.
IPR018378. C-type_lectin_CS.
IPR016187. C-type_lectin_fold.
IPR001881. EGF-like_Ca-bd_dom.
IPR013032. EGF-like_CS.
IPR000742. EGF-like_dom.
IPR000152. EGF-type_Asp/Asn_hydroxyl_site.
IPR018097. EGF_Ca-bd_CS.
IPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003599. Ig_sub.
IPR013106. Ig_V-set.
IPR000538. Link_dom.
IPR000436. Sushi_SCR_CCP_dom.
[Graphical view]
PfamiPF00008. EGF. 1 hit.
PF00059. Lectin_C. 1 hit.
PF00084. Sushi. 1 hit.
PF07686. V-set. 1 hit.
PF00193. Xlink. 4 hits.
[Graphical view]
PRINTSiPR01265. LINKMODULE.
SMARTiSM00032. CCP. 1 hit.
SM00034. CLECT. 1 hit.
SM00181. EGF. 1 hit.
SM00179. EGF_CA. 1 hit.
SM00409. IG. 1 hit.
SM00445. LINK. 4 hits.
[Graphical view]
SUPFAMiSSF48726. SSF48726. 1 hit.
SSF56436. SSF56436. 5 hits.
SSF57535. SSF57535. 1 hit.
PROSITEiPS00010. ASX_HYDROXYL. 1 hit.
PS00615. C_TYPE_LECTIN_1. 1 hit.
PS50041. C_TYPE_LECTIN_2. 1 hit.
PS00022. EGF_1. 1 hit.
PS50026. EGF_3. 1 hit.
PS01187. EGF_CA. 1 hit.
PS50835. IG_LIKE. 1 hit.
PS01241. LINK_1. 4 hits.
PS50963. LINK_2. 4 hits.
PS50923. SUSHI. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P79787-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTTLLLVFVC LQAITTAASA ELSDSSDGLE VKIPEQSPLR VVLGSSLNIP
60 70 80 90 100
CYFNIPEEED TNALLTPRIK WSKLSNGTEI VLLVATGGKI RLNAEYREVI
110 120 130 140 150
SLPNYPAIPT DATLEIKALR SNHTGIYRCE VMYGIEDRQY TIEVLVKGVV
160 170 180 190 200
FHYRAISTRY TLNFERAKQA CIQNSAVIAT PEQLQAAYED GYEQCDAGWL
210 220 230 240 250
ADQTVRYPIH LPRERCYGDK DEFPGVRTYG VRETDETYDV YCYAEQMQGK
260 270 280 290 300
VFYATSPEKF TFQEAFDKCH SLGARLATTG ELYLAWKDGM DMCSAGWLAD
310 320 330 340 350
RSVRYPISRA RPNCGGNLVG VRTVYLNPAN QTGYPHPSSR YDAICYSGDD
360 370 380 390 400
FEALVPGLFT DEVGTELGSA FTIQTVTQTE VELPLPRNVT EEEARGSIAT
410 420 430 440 450
LEPMEITSTA TELYEAFTVL PDLFATSVTV ETASPREENV TREEITGIWA
460 470 480 490 500
VPEEVTTSVS GTAFTTGMAE VSSVEEAIAV TATPGLESAS PFTIEDHLVQ
510 520 530 540 550
VTAAPDVALL PRQPISPTGV VFHYRAATSR YAFSFIQAQQ ACLENNAVIA
560 570 580 590 600
TPEQLQAAYE AGFDQCDAGW LRDQTVRYPI VNPRSNCVGD KESSPGVRSY
610 620 630 640 650
GMRPASETYD VYCYIDRLKG EVFFATQPEQ FTFQEAQLYC ESQNATLASA
660 670 680 690 700
GQLHAAWKQG LDRCYPGWLA DGSLRYPIVR PRPACGGDAP GVRTIYQHHN
710 720 730 740 750
QTGFPDPLSR HHAFCFRALP SVVEEGVTSL FEEEVMVTQL IPGVEGIPSG
760 770 780 790 800
EETTVETELS SEPESQTAQG TEVFPTDVSL LSARPSAFPP ATVIPEETST
810 820 830 840 850
NASIPEVSGE FPESGEHPTS GEPSASGAPD TSGEPTSVGF ELSGEQSGIG
860 870 880 890 900
ESGLPSVDLQ SSGFVPGESG LPSGDVSGLP SGIVDISGLP SAEEEVTVSV
910 920 930 940 950
SRIPEVSGMP SGAESSGLHS GFSGEISGTE LISGLPSGEE SGLASGFPTI
960 970 980 990 1000
SLVDSTLVEV VTAAPGRQEE GKGSIGVSGE EELSGFPSAE WDSSGARGLP
1010 1020 1030 1040 1050
SGAETSGEQS GVPELSGEHS GVPGLSGEAF EVPELSGEHS GVTELSGEHS
1060 1070 1080 1090 1100
GLPELSGVPF GVPELSGFPS GLDISGEPSG APEVSGPVDV SGLTSGVDGS
1110 1120 1130 1140 1150
GEVSGVTFIS TSLQEVTTPS VAEAEAKEIL EISGLPSGET SGMVSGSLDV
1160 1170 1180 1190 1200
SGQPSGHIGF GGSASGVLEM SGFPGGAVES SGEASGVEVT SGLASGEESG
1210 1220 1230 1240 1250
LTSGFPTVSL VDTTLVEVVT QTSVAQEVGE GPSGMIEISG FLSGDRGVSG
1260 1270 1280 1290 1300
EGSGAVQSSG LPSGTGDFSG EPSGIPYFSG DISGATDLSG QPSAVTDISG
1310 1320 1330 1340 1350
EDSGLPEVTL VTSDLVEVVT RPTVSQELGG ETAVTFPYVF GPSGEGSASG
1360 1370 1380 1390 1400
DLSGGASAEG GIETSTAYEI SGESSAFPET SIETSTDQEI SGEASAYPEI
1410 1420 1430 1440 1450
SVETSTHLET SGETSAYPEI STETSTIQEV SGETSAFPEI STETSTIQEI
1460 1470 1480 1490 1500
SGETSAFPEI RIETSTFQEI SGETSAFPEI RIETSTSQEA RGETSAFAEI
1510 1520 1530 1540 1550
TIEASTVHET SGETSAFPEI SIETSTVHET SGETSAFPEI SIETSTVHEI
1560 1570 1580 1590 1600
SGESSAFPEI RIETSTSQEA RGETSAFPEI TTEASTIQEI SGETSAFPEI
1610 1620 1630 1640 1650
SIETSTVREI SGETSAFPEI RIETSTSQEA RGETSALPEI TIETSTVHET
1660 1670 1680 1690 1700
SGEASAFPEI SIETSTRQEA RGEASAYPEV SIEASTTQEV SGESSAFPEI
1710 1720 1730 1740 1750
SVETSTSQEA RGETSAFPEI GIETSTAHEG SGETPGLPAV STDTAATSLA
1760 1770 1780 1790 1800
SGEPSGAPEK ETPDTTSHLI TGVSGETSVP DAVISTSAPD VELAQEPRNT
1810 1820 1830 1840 1850
EETQLEIEPS TPAASGQETE TAAVLDNPHL PATATAALHP ASQEAVDALG
1860 1870 1880 1890 1900
PTTEDTDECH SSPCLNGATC VDGIDSFKCL CLPSYGGDLC EIDLANCEEG
1910 1920 1930 1940 1950
WIKFQGHCYR HFEERETWMD AESRCREHQA HLSSIITPEE QEFVNSHAQD
1960 1970 1980 1990 2000
YQWIGLSDRA VENDFRWSDG HSLQFENWRP NQPDNFFFAG EDCVVMIWHE
2010 2020 2030 2040 2050
QGEWNDVPCN YHLPFTCKKG TVACGDPPVV ENARTFGRKK DRYEINSLVR
2060 2070 2080 2090 2100
YQCDHGYIQR HVPTIRCQPN GHWEEPRISC TNPSSYQHRL YKRSPRSRLR

PGVVHRPTH
Length:2,109
Mass (Da):223,482
Last modified:May 1, 1997 - v1
Checksum:i38492D317D245A97
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U78555 mRNA. Translation: AAC60053.1.
RefSeqiNP_990286.2. NM_204955.2.
UniGeneiGga.3977.

Genome annotation databases

GeneIDi395798.
KEGGigga:395798.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U78555 mRNA. Translation: AAC60053.1.
RefSeqiNP_990286.2. NM_204955.2.
UniGeneiGga.3977.

3D structure databases

ProteinModelPortaliP79787.
SMRiP79787. Positions 1897-2020.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi9031.ENSGALP00000037775.

Proteomic databases

PaxDbiP79787.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi395798.
KEGGigga:395798.

Organism-specific databases

CTDi176.

Phylogenomic databases

eggNOGiENOG410IJP2. Eukaryota.
ENOG410XRES. LUCA.
HOVERGENiHBG007982.
KOiK06792.

Family and domain databases

Gene3Di2.60.40.10. 1 hit.
3.10.100.10. 5 hits.
InterProiIPR001304. C-type_lectin.
IPR016186. C-type_lectin-like.
IPR018378. C-type_lectin_CS.
IPR016187. C-type_lectin_fold.
IPR001881. EGF-like_Ca-bd_dom.
IPR013032. EGF-like_CS.
IPR000742. EGF-like_dom.
IPR000152. EGF-type_Asp/Asn_hydroxyl_site.
IPR018097. EGF_Ca-bd_CS.
IPR007110. Ig-like_dom.
IPR013783. Ig-like_fold.
IPR003599. Ig_sub.
IPR013106. Ig_V-set.
IPR000538. Link_dom.
IPR000436. Sushi_SCR_CCP_dom.
[Graphical view]
PfamiPF00008. EGF. 1 hit.
PF00059. Lectin_C. 1 hit.
PF00084. Sushi. 1 hit.
PF07686. V-set. 1 hit.
PF00193. Xlink. 4 hits.
[Graphical view]
PRINTSiPR01265. LINKMODULE.
SMARTiSM00032. CCP. 1 hit.
SM00034. CLECT. 1 hit.
SM00181. EGF. 1 hit.
SM00179. EGF_CA. 1 hit.
SM00409. IG. 1 hit.
SM00445. LINK. 4 hits.
[Graphical view]
SUPFAMiSSF48726. SSF48726. 1 hit.
SSF56436. SSF56436. 5 hits.
SSF57535. SSF57535. 1 hit.
PROSITEiPS00010. ASX_HYDROXYL. 1 hit.
PS00615. C_TYPE_LECTIN_1. 1 hit.
PS50041. C_TYPE_LECTIN_2. 1 hit.
PS00022. EGF_1. 1 hit.
PS50026. EGF_3. 1 hit.
PS01187. EGF_CA. 1 hit.
PS50835. IG_LIKE. 1 hit.
PS01241. LINK_1. 4 hits.
PS50963. LINK_2. 4 hits.
PS50923. SUSHI. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiP79787_CHICK
AccessioniPrimary (citable) accession number: P79787
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: September 7, 2016
This is version 108 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.