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Protein
Submitted name:

Homeodomain-containing protein

Gene

hesx1

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • forebrain development Source: ZFIN
  • regulation of transcription, DNA-templated Source: InterPro
Complete GO annotation...

Keywords - Ligandi

DNA-bindingUniRule annotation

Names & Taxonomyi

Protein namesi
Submitted name:
Homeodomain-containing proteinImported
Gene namesi
Name:hesx1Imported
Synonyms:DANFImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Organism-specific databases

ZFINiZDB-GENE-990415-130. hesx1.

Subcellular locationi

  • Nucleus UniRule annotation

GO - Cellular componenti

Complete GO annotation...

Keywords - Cellular componenti

NucleusUniRule annotationImported

Structurei

3D structure databases

ProteinModelPortaliP79738.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Domaini78 – 13861Homeobox DNA-bindingInterPro annotationAdd
BLAST

Keywords - Domaini

HomeoboxUniRule annotation

Phylogenomic databases

HOVERGENiHBG004226.
KOiK09354.
PhylomeDBiP79738.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR009057. Homeodomain-like.
[Graphical view]
PfamiPF00046. Homeobox. 1 hit.
[Graphical view]
SMARTiSM00389. HOX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P79738-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MASLANSPSV FTIDSILGLD RPEQRTCPYR PWTDVKPACQ NRRVVTESDA
60 70 80 90 100
PVDVRENEDG KSFSKSPTDS YRRTLNWYIG RRPRTAFSSV QIKILESVFQ
110 120 130 140 150
VNSYPGIDIR EELAKKLQLD EDRIQIWFQN RRAKLKRSHR ESQFLMVKNV
160
LNDLQIGREE H
Length:161
Mass (Da):18,823
Last modified:May 1, 1997 - v1
Checksum:i044F4B732CECB676
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U65433 mRNA. Translation: AAB88392.1.
RefSeqiNP_571424.1. NM_131349.1.
UniGeneiDr.160293.
Dr.226.

Genome annotation databases

GeneIDi30620.
KEGGidre:30620.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U65433 mRNA. Translation: AAB88392.1.
RefSeqiNP_571424.1. NM_131349.1.
UniGeneiDr.160293.
Dr.226.

3D structure databases

ProteinModelPortaliP79738.
ModBaseiSearch...
MobiDBiSearch...

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

GeneIDi30620.
KEGGidre:30620.

Organism-specific databases

CTDi8820.
ZFINiZDB-GENE-990415-130. hesx1.

Phylogenomic databases

HOVERGENiHBG004226.
KOiK09354.
PhylomeDBiP79738.

Miscellaneous databases

NextBioi20806982.

Family and domain databases

Gene3Di1.10.10.60. 1 hit.
InterProiIPR017970. Homeobox_CS.
IPR001356. Homeobox_dom.
IPR009057. Homeodomain-like.
[Graphical view]
PfamiPF00046. Homeobox. 1 hit.
[Graphical view]
SMARTiSM00389. HOX. 1 hit.
[Graphical view]
SUPFAMiSSF46689. SSF46689. 1 hit.
PROSITEiPS00027. HOMEOBOX_1. 1 hit.
PS50071. HOMEOBOX_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Anf: a novel class of vertebrate homeobox genes expressed at the anterior end of the main embryonic axis."
    Kazanskaya O.V., Severtzova E.A., Barth K.A., Ermakova G.V., Lukyanov S.A., Benyumov A.O., Pannese M., Boncinelli E., Wilson S.W., Zaraisky A.G.
    Gene 200:25-34(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE.
    Tissue: ForebrainImported.

Entry informationi

Entry nameiP79738_DANRE
AccessioniPrimary (citable) accession number: P79738
Entry historyi
Integrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: December 9, 2015
This is version 108 of the entry and version 1 of the sequence. [Complete history]
Entry statusiUnreviewed (UniProtKB/TrEMBL)

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.