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Protein

ELAV-like protein

Gene

elavl3

Organism
Danio rerio (Zebrafish) (Brachydanio rerio)
Status
Unreviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

GO - Molecular functioni

GO - Biological processi

  • regulation of neurogenesis Source: ZFIN

Keywordsi

Molecular functionRNA-bindingPROSITE-ProRule annotationSAAS annotation

Names & Taxonomyi

Protein namesi
Recommended name:
ELAV-like proteinUniRule annotation
Gene namesi
Name:elavl3Imported
Synonyms:zHuCImported
OrganismiDanio rerio (Zebrafish) (Brachydanio rerio)Imported
Taxonomic identifieri7955 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiActinopterygiiNeopterygiiTeleosteiOstariophysiCypriniformesCyprinidaeDanio

Organism-specific databases

ZFINiZDB-GENE-980526-76 elavl3

Structurei

3D structure databases

ProteinModelPortaliP79736
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini38 – 116RRMInterPro annotationAdd BLAST79
Domaini124 – 204RRMInterPro annotationAdd BLAST81
Domaini262 – 340RRMInterPro annotationAdd BLAST79

Sequence similaritiesi

Belongs to the RRM elav family.UniRule annotation

Keywords - Domaini

RepeatSAAS annotation

Phylogenomic databases

eggNOGiKOG0145 Eukaryota
ENOG410XP7S LUCA
HOGENOMiHOG000231162
HOVERGENiHBG002295
KOiK13208

Family and domain databases

CDDicd12650 RRM1_Hu, 1 hit
cd12655 RRM3_HuC, 1 hit
Gene3Di3.30.70.330, 3 hits
InterProiView protein in InterPro
IPR006548 ELAD_HU_SF
IPR034775 ELAV/Hu_RRM1
IPR034915 HuC_RRM3
IPR002343 Hud_Sxl_RNA
IPR012677 Nucleotide-bd_a/b_plait_sf
IPR035979 RBD_domain_sf
IPR000504 RRM_dom
IPR003954 RRM_dom_euk
PfamiView protein in Pfam
PF00076 RRM_1, 3 hits
PRINTSiPR00961 HUDSXLRNA
SMARTiView protein in SMART
SM00360 RRM, 3 hits
SM00361 RRM_1, 2 hits
SUPFAMiSSF54928 SSF54928, 3 hits
TIGRFAMsiTIGR01661 ELAV_HUD_SF, 1 hit
PROSITEiView protein in PROSITE
PS50102 RRM, 3 hits

Sequencei

Sequence statusi: Complete.

P79736-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MVTIISTMET QVSNGPSGTS LPNGPVISTN GATDDSKTNL IVNYLPQNMT
60 70 80 90 100
QEEFKSLFGS IGEIESCKLV RDKITGQSLG YGFVNYVDPN DADKAINTLN
110 120 130 140 150
GLKLQTKTIK VSYARPSSAS IRDANLYVSG LPKTMSQKDM EQLFSQYGRI
160 170 180 190 200
ITSRILVNQV TGISRGVGFI RFDKRNEAEE AIKGLNGQKP LGAAEPITVK
210 220 230 240 250
FANNPSQKTG QALLTQLYQT AARRYTGPLH HQTQRFRFSP ITIDSMTSLA
260 270 280 290 300
GVNLTGPTGA GWCIFVYNLS PEADESVLWQ LFGPFGAVTN VKVIRDFTTN
310 320 330 340
KCKGFGFVTM TNYDEAAMAI ASLNGYRLGD RVLQVSFKTS KQHKA
Length:345
Mass (Da):37,681
Last modified:May 1, 1997 - v1
Checksum:i01DF10EDD9C957C7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U62018 mRNA Translation: AAB36515.1
RefSeqiNP_571524.1, NM_131449.1
UniGeneiDr.75060

Genome annotation databases

GeneIDi30732
KEGGidre:30732

Similar proteinsi

Entry informationi

Entry nameiP79736_DANRE
AccessioniPrimary (citable) accession number: P79736
Entry historyiIntegrated into UniProtKB/TrEMBL: May 1, 1997
Last sequence update: May 1, 1997
Last modified: March 28, 2018
This is version 108 of the entry and version 1 of the sequence. See complete history.
Entry statusiUnreviewed (UniProtKB/TrEMBL)

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