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P79226

- ALDOB_RABIT

UniProt

P79226 - ALDOB_RABIT

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Protein
Fructose-bisphosphate aldolase B
Gene
ALDOB, ALDB
Organism
Oryctolagus cuniculus (Rabbit)
Status
Reviewed - Annotation score: 5 out of 5 - Experimental evidence at protein leveli

Functioni

Catalytic activityi

D-fructose 1,6-bisphosphate = glycerone phosphate + D-glyceraldehyde 3-phosphate.

Pathwayi

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Binding sitei56 – 561Substrate
Binding sitei147 – 1471Substrate
Active sitei188 – 1881Proton acceptor By similarity
Active sitei230 – 2301Schiff-base intermediate with dihydroxyacetone-P
Sitei364 – 3641Necessary for preference for fructose 1,6-bisphosphate over fructose 1-phosphate

GO - Molecular functioni

  1. fructose binding Source: Ensembl
  2. fructose-bisphosphate aldolase activity Source: UniProtKB-EC
Complete GO annotation...

GO - Biological processi

  1. NADH oxidation Source: Ensembl
  2. fructose 1,6-bisphosphate metabolic process Source: Ensembl
  3. fructose metabolic process Source: Ensembl
  4. glycolytic process Source: UniProtKB-UniPathway
  5. positive regulation of ATPase activity Source: Ensembl
  6. vacuolar proton-transporting V-type ATPase complex assembly Source: Ensembl
Complete GO annotation...

Keywords - Molecular functioni

Lyase

Keywords - Biological processi

Glycolysis

Keywords - Ligandi

Schiff base

Enzyme and pathway databases

SABIO-RKP79226.
UniPathwayiUPA00109; UER00183.

Names & Taxonomyi

Protein namesi
Recommended name:
Fructose-bisphosphate aldolase B (EC:4.1.2.13)
Alternative name(s):
Liver-type aldolase
Gene namesi
Name:ALDOB
Synonyms:ALDB
OrganismiOryctolagus cuniculus (Rabbit)
Taxonomic identifieri9986 [NCBI]
Taxonomic lineageiEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresGliresLagomorphaLeporidaeOryctolagus
ProteomesiUP000001811: Chromosome 1

Subcellular locationi

GO - Cellular componenti

  1. centriolar satellite Source: Ensembl
Complete GO annotation...

Keywords - Cellular componenti

Cytoplasm, Cytoskeleton

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Initiator methioninei1 – 11Removed By similarity
Chaini2 – 364363Fructose-bisphosphate aldolase B
PRO_0000216942Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Modified residuei2 – 21N-acetylalanine By similarity
Modified residuei13 – 131N6-succinyllysine By similarity
Modified residuei36 – 361Phosphoserine By similarity
Modified residuei39 – 391Phosphothreonine By similarity
Modified residuei121 – 1211N6-succinyllysine By similarity
Modified residuei317 – 3171N6-succinyllysine By similarity

Keywords - PTMi

Acetylation, Phosphoprotein

Proteomic databases

PRIDEiP79226.

Interactioni

Subunit structurei

Homotetramer. Interacts with BBS1, BBS2, BBS4 and BBS7 By similarity.

Protein-protein interaction databases

STRINGi9986.ENSOCUP00000012843.

Structurei

Secondary structure

Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Helixi10 – 2415
Helixi25 – 273
Beta strandi29 – 335
Helixi37 – 4610
Helixi53 – 6412
Helixi68 – 725
Beta strandi74 – 796
Helixi81 – 844
Helixi94 – 1007
Beta strandi104 – 1085
Beta strandi113 – 1153
Beta strandi119 – 1213
Beta strandi123 – 1253
Helixi131 – 14010
Beta strandi145 – 1528
Helixi161 – 18020
Beta strandi184 – 1918
Helixi199 – 21921
Helixi224 – 2263
Helixi246 – 25813
Beta strandi267 – 2704
Helixi277 – 28913
Beta strandi296 – 3038
Helixi304 – 31411
Helixi318 – 3203
Helixi321 – 33818
Turni339 – 3413
Beta strandi353 – 3575

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
1FDJX-ray2.10A/B/C/D2-364[»]
ProteinModelPortaliP79226.
SMRiP79226. Positions 2-364.

Miscellaneous databases

EvolutionaryTraceiP79226.

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiCOG3588.
GeneTreeiENSGT00390000010235.
HOGENOMiHOG000220876.
HOVERGENiHBG002386.
OMAiDMEHCQY.
OrthoDBiEOG744T94.
TreeFamiTF314203.

Family and domain databases

Gene3Di3.20.20.70. 1 hit.
InterProiIPR013785. Aldolase_TIM.
IPR000741. FBA_I.
[Graphical view]
PfamiPF00274. Glycolytic. 1 hit.
[Graphical view]
PROSITEiPS00158. ALDOLASE_CLASS_I. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P79226-1 [UniParc]FASTAAdd to Basket

« Hide

MAHRFPALTP EQKKELSDIA QRIVANGKGI LAADESVGTM GNRLQRIKVE    50
NTEENRRQFR EILFTVDNSI NQSIGGVILF HETLYQKDSQ GKLFRNILKE 100
KGIVVGIKLD QGGAPLAGTN KETTIQGLDG LSERCAQYKK DGVDFGKWRA 150
VLRIADQCPS SLAIQENANT LARYASICQQ NGLVPIVEPE VIPDGDHDLE 200
HCQYVTEKVL AAVYKALNDH HVYLEGTLLK PNMVTAGHAC TKKYTPEQVA 250
MATVTALHRT VPAAVPGICF LSGGMSEEDA TLNLNAINLC PLPKPWKLSF 300
SYGRALQASA LAAWGGKAEN KKATQEAFMK RAVVNCQAAK GQYVHTGSSG 350
AASTQSLFTA SYTY 364
Length:364
Mass (Da):39,605
Last modified:January 23, 2007 - v3
Checksum:i65A58A50906EA954
GO

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U85645 Genomic DNA. Translation: AAB42087.1.
PIRiA28856.
RefSeqiNP_001164585.1. NM_001171114.1.
UniGeneiOcu.4530.

Genome annotation databases

EnsembliENSOCUT00000014943; ENSOCUP00000012843; ENSOCUG00000014944.
GeneIDi100328925.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBL
GenBank
DDBJ
Links Updated
U85645 Genomic DNA. Translation: AAB42087.1 .
PIRi A28856.
RefSeqi NP_001164585.1. NM_001171114.1.
UniGenei Ocu.4530.

3D structure databases

Select the link destinations:
PDBe
RCSB PDB
PDBj
Links Updated
Entry Method Resolution (Å) Chain Positions PDBsum
1FDJ X-ray 2.10 A/B/C/D 2-364 [» ]
ProteinModelPortali P79226.
SMRi P79226. Positions 2-364.
ModBasei Search...

Protein-protein interaction databases

STRINGi 9986.ENSOCUP00000012843.

Proteomic databases

PRIDEi P79226.

Protocols and materials databases

Structural Biology Knowledgebase Search...

Genome annotation databases

Ensembli ENSOCUT00000014943 ; ENSOCUP00000012843 ; ENSOCUG00000014944 .
GeneIDi 100328925.

Organism-specific databases

CTDi 229.

Phylogenomic databases

eggNOGi COG3588.
GeneTreei ENSGT00390000010235.
HOGENOMi HOG000220876.
HOVERGENi HBG002386.
OMAi DMEHCQY.
OrthoDBi EOG744T94.
TreeFami TF314203.

Enzyme and pathway databases

UniPathwayi UPA00109 ; UER00183 .
SABIO-RK P79226.

Miscellaneous databases

EvolutionaryTracei P79226.

Family and domain databases

Gene3Di 3.20.20.70. 1 hit.
InterProi IPR013785. Aldolase_TIM.
IPR000741. FBA_I.
[Graphical view ]
Pfami PF00274. Glycolytic. 1 hit.
[Graphical view ]
PROSITEi PS00158. ALDOLASE_CLASS_I. 1 hit.
[Graphical view ]
ProtoNeti Search...

Publicationsi

  1. "Identification of conserved promoter elements for aldB and isozyme specific residues in aldolase B."
    Berardini T.Z., Amsden A.B., Penhoet E.E., Tolan D.R.
    Comp. Biochem. Physiol. 122B:53-61(1999) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
  2. "Enhanced electron-density envelopes by extended solvent definition."
    Blom N., Sygush J.
    Acta Crystallogr. D 54:461-466(1998) [PubMed] [Europe PMC] [Abstract]
    Cited for: X-RAY CRYSTALLOGRAPHY (1.65 ANGSTROMS).

Entry informationi

Entry nameiALDOB_RABIT
AccessioniPrimary (citable) accession number: P79226
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: January 23, 2007
Last modified: September 3, 2014
This is version 95 of the entry and version 3 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programChordata Protein Annotation Program

Miscellaneousi

Miscellaneous

In vertebrates, 3 forms of this ubiquitous glycolytic enzyme are found, aldolase A in muscle, aldolase B in liver and aldolase C in brain.

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. PATHWAY comments
    Index of metabolic and biosynthesis pathways
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references
  3. SIMILARITY comments
    Index of protein domains and families

External Data

Dasty 3

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