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Protein

40S ribosomal protein S19-B

Gene

rps1902

Organism
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Miscellaneous

There are two genes for S19 in S.pombe.

GO - Molecular functioni

GO - Biological processi

Keywordsi

Molecular functionRibonucleoprotein, Ribosomal protein

Enzyme and pathway databases

ReactomeiR-SPO-156827 L13a-mediated translational silencing of Ceruloplasmin expression
R-SPO-1799339 SRP-dependent cotranslational protein targeting to membrane
R-SPO-72689 Formation of a pool of free 40S subunits
R-SPO-72695 Formation of the ternary complex, and subsequently, the 43S complex
R-SPO-72702 Ribosomal scanning and start codon recognition
R-SPO-72706 GTP hydrolysis and joining of the 60S ribosomal subunit
R-SPO-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
R-SPO-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)

Names & Taxonomyi

Protein namesi
Recommended name:
40S ribosomal protein S19-B
Alternative name(s):
S16-B
Gene namesi
Name:rps1902
Synonyms:rps19b
ORF Names:SPBC649.02
OrganismiSchizosaccharomyces pombe (strain 972 / ATCC 24843) (Fission yeast)
Taxonomic identifieri284812 [NCBI]
Taxonomic lineageiEukaryotaFungiDikaryaAscomycotaTaphrinomycotinaSchizosaccharomycetesSchizosaccharomycetalesSchizosaccharomycetaceaeSchizosaccharomyces
Proteomesi
  • UP000002485 Componenti: Chromosome II

Organism-specific databases

EuPathDBiFungiDB:SPBC649.02
PomBaseiSPBC649.02 rps1902

Subcellular locationi

Extracellular region or secreted Cytosol Plasma membrane Cell wall Cytoskeleton Vacuole Endosome Peroxisome ER Golgi apparatus Nucleus Mitochondrion Manual annotation Automatic computational assertionGraphics by Christian Stolte; Source: COMPARTMENTS

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001538341 – 14340S ribosomal protein S19-BAdd BLAST143

Proteomic databases

MaxQBiP79016
PaxDbiP79016
PRIDEiP79016

PTM databases

iPTMnetiP79016

Interactioni

Protein-protein interaction databases

BioGridi277599, 10 interactors
STRINGi4896.SPBC649.02.1

Structurei

3D structure databases

ProteinModelPortaliP79016
SMRiP79016
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

HOGENOMiHOG000230649
InParanoidiP79016
KOiK02966
OMAiRMVEKHP
OrthoDBiEOG092C5NFY
PhylomeDBiP79016

Family and domain databases

Gene3Di1.10.10.2700, 1 hit
InterProiView protein in InterPro
IPR001266 Ribosomal_S19e
IPR018277 Ribosomal_S19e_CS
IPR038111 Ribosomal_S19e_sf
IPR036390 WH_DNA-bd_sf
PANTHERiPTHR11710 PTHR11710, 1 hit
PfamiView protein in Pfam
PF01090 Ribosomal_S19e, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD003854 Ribosomal_S19e, 1 hit
SMARTiView protein in SMART
SM01413 Ribosomal_S19e, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS00628 RIBOSOMAL_S19E, 1 hit

Sequencei

Sequence statusi: Complete.

P79016-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAGVSVKDVD AQQFINAYAA FLKRSGKMTT PQWIDIVKTG THKELAPYDP
60 70 80 90 100
DWYYVRAAAI ARHIYLRKQV GVGRLCKVYG GSVNRGMRPS HHRDGSGSVQ
110 120 130 140
RKVVQSLEKI GVLEKSDNGG RRISQQGQRD LDRIAYSLLE DEE
Length:143
Mass (Da):16,062
Last modified:December 15, 1998 - v2
Checksum:i82E04119EDE314D7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
CU329671 Genomic DNA Translation: CAA19044.1
PIRiT40595
RefSeqiNP_595221.1, NM_001021127.2

Genome annotation databases

EnsemblFungiiSPBC649.02.1; SPBC649.02.1:pep; SPBC649.02
GeneIDi2541084
KEGGispo:SPBC649.02

Similar proteinsi

Entry informationi

Entry nameiRS19B_SCHPO
AccessioniPrimary (citable) accession number: P79016
Secondary accession number(s): O59752
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: December 15, 1998
Last modified: May 23, 2018
This is version 122 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programFungal Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Schizosaccharomyces pombe
    Schizosaccharomyces pombe: entries and gene names
  2. Ribosomal proteins
    Ribosomal proteins families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

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