Skip Header

 
Contribute Send feedback
Read comments (0) or add your own

Reviewed, UniProtKB/Swiss-Prot P78385 (KRT83_HUMAN)

Last modified July 7, 2009. Version 72. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (5) | Third-party data | Customize display text xml rdf/xml gff fasta
Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Web resources · Cross-references · Entry information · Relevant documents

Names and origin

Protein namesRecommended name:
    Keratin, type II cuticular Hb3
Alternative name(s):
    Type II hair keratin Hb3
    Keratin-83
      Short name=K83
    K2.10
Gene names
Name: KRT83
Synonyms: KRTHB3
OrganismHomo sapiens (Human) [Complete proteome]
Taxonomic identifier9606 [NCBI]
Taxonomic lineageEukaryotaMetazoaChordataCraniataVertebrataEuteleostomiMammaliaEutheriaEuarchontogliresPrimatesHaplorrhiniCatarrhiniHominidaeHomo

Protein attributes

Sequence length493 AA.
Sequence statusComplete.
Sequence processingThe displayed sequence is not processed.
Protein existenceEvidence at protein level.

General annotation (Comments)

Subunit structure

Heterotetramer of two type I and two type II keratins.

Tissue specificity

Synthesis begins in the cortex 10-15 cell layers above the apex of the dermal papilla and ends abruptly in the middle of the cortex. Ref.1

Involvement in disease

Defects in KRT83 are a cause of Monilethrix [MIM:158000]. Monilethrix is an autosomal dominant hair disorder characterized clinically by alopecia and follicular papules. Affected hairs have uniform elliptical nodes of normal thickness and intermittent constrictions, internodes at which the hair easily breaks. Usually only the scalp is involved, but in severe forms, the secondary sexual hair, eyebrows, eyelashes, and nails may also be affected. Ref.5

Miscellaneous

There are two types of hair/microfibrillar keratin, I (acidic) and II (neutral to basic).

Sequence similarities

Belongs to the intermediate filament family.

Caution

Maps to a duplicated region on chromosome 12.

Ontologies

Keywords
   Cellular componentIntermediate filament
Keratin
   Coding sequence diversityPolymorphism
   DiseaseDisease mutation
   DomainCoiled coil
   Technical termComplete proteome
Gene Ontology (GO)
   Biological processepidermis development Ref.1

Traceable author statement. Source: ProtInc

   Cellular componentkeratin filament

Inferred from electronic annotation. Source: InterPro

   Molecular functionstructural molecule activity

Inferred from electronic annotation. Source: InterPro

Complete GO annotation...

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 493493Keratin, type II cuticular Hb3
PRO_0000063699

Regions

Region1 – 111111Head
Region112 – 418307Rod
Region112 – 14635Coil 1A
Region147 – 15610Linker 1
Region157 – 257101Coil 1B
Region258 – 27417Linker 12
Region275 – 418144Coil 2
Region419 – 49375Tail

Natural variations

Natural variant1491R → C: dbSNP rs2857663. Ref.1 Ref.4
VAR_018119
Natural variant2791I → M: dbSNP rs2852464. Ref.1 Ref.4
VAR_018120
Natural variant4071E → K in Monilethrix.
VAR_023052
Natural variant4931H → Y: dbSNP rs2857671. Ref.1 Ref.4 Ref.3
VAR_018121

Experimental info

Sequence conflict671S → D in CAA67578. Ref.1
Sequence conflict3141I → V in BAG37418. Ref.3
Sequence conflict4731C → R in BAG37418. Ref.3

Sequences

Sequence LengthMass (Da)Tools
P78385-1 [UniParc].

Last modified December 16, 2008. Version 2.
Checksum: 73BE2DA2C93F3EB6

FASTA49354,195
        10         20         30         40         50         60 
MTCGFNSIGC GFRPGNFSCV SACGPRPSRC CITAAPYRGI SCYRGLTGGF GSHSVCGGFR 

        70         80         90        100        110        120 
AGSCGRSFGY RSGGVCGPSP PCITTVSVNE SLLTPLNLEI DPNAQCVKQE EKEQIKSLNS 

       130        140        150        160        170        180 
RFAAFIDKVR FLEQQNKLLE TKLQFYQNRE CCQSNLEPLF AGYIETLRRE AECVEADSGR 

       190        200        210        220        230        240 
LASELNHVQE VLEGYKKKYE EEVALRATAE NEFVALKKDV DCAYLRKSDL EANVEALIQE 

       250        260        270        280        290        300 
IDFLRRLYEE EIRILQSHIS DTSVVVKLDN SRDLNMDCIV AEIKAQYDDI ATRSRAEAES 

       310        320        330        340        350        360 
WYRSKCEEMK ATVIRHGETL RRTKEEINEL NRMIQRLTAE VENAKCQNSK LEAAVAQSEQ 

       370        380        390        400        410        420 
QGEAALSDAR CKLAELEGAL QKAKQDMACL IREYQEVMNS KLGLDIEIAT YRRLLEGEEQ 

       430        440        450        460        470        480 
RLCEGVEAVN VCVSSSRGGV VCGDLCVSGS RPVTGSVCSA PCNGNLVVST GLCKPCGQLN 

       490 
TTCGGGSCGQ GRH 

« Hide

References

« Hide 'large scale' references
[1]"Sequences and differential expression of three novel human type-II hair keratins."
Rogers M.A., Langbein L., Praetzel S., Krieg T., Winter H., Schweizer J.
Differentiation 61:187-194(1997) [PubMed: 9084137] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [MRNA], TISSUE SPECIFICITY, VARIANTS CYS-149; MET-279 AND TYR-493.
Tissue: Scalp.
[2]"Characterization of a 300 kbp region of human DNA containing the type II hair keratin."
Rogers M.A., Winter H., Langbein L., Wolf C., Schweizer J.
J. Invest. Dermatol. 114:464-472(2000) [PubMed: 10692104] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
[3]"Complete sequencing and characterization of 21,243 full-length human cDNAs."
Ota T., Suzuki Y., Nishikawa T., Otsuki T., Sugiyama T., Irie R., Wakamatsu A., Hayashi K., Sato H., Nagai K., Kimura K., Makita H., Sekine M., Obayashi M., Nishi T., Shibahara T., Tanaka T., Ishii S. expand/collapse author list , Yamamoto J., Saito K., Kawai Y., Isono Y., Nakamura Y., Nagahari K., Murakami K., Yasuda T., Iwayanagi T., Wagatsuma M., Shiratori A., Sudo H., Hosoiri T., Kaku Y., Kodaira H., Kondo H., Sugawara M., Takahashi M., Kanda K., Yokoi T., Furuya T., Kikkawa E., Omura Y., Abe K., Kamihara K., Katsuta N., Sato K., Tanikawa M., Yamazaki M., Ninomiya K., Ishibashi T., Yamashita H., Murakawa K., Fujimori K., Tanai H., Kimata M., Watanabe M., Hiraoka S., Chiba Y., Ishida S., Ono Y., Takiguchi S., Watanabe S., Yosida M., Hotuta T., Kusano J., Kanehori K., Takahashi-Fujii A., Hara H., Tanase T.-O., Nomura Y., Togiya S., Komai F., Hara R., Takeuchi K., Arita M., Imose N., Musashino K., Yuuki H., Oshima A., Sasaki N., Aotsuka S., Yoshikawa Y., Matsunawa H., Ichihara T., Shiohata N., Sano S., Moriya S., Momiyama H., Satoh N., Takami S., Terashima Y., Suzuki O., Nakagawa S., Senoh A., Mizoguchi H., Goto Y., Shimizu F., Wakebe H., Hishigaki H., Watanabe T., Sugiyama A., Takemoto M., Kawakami B., Yamazaki M., Watanabe K., Kumagai A., Itakura S., Fukuzumi Y., Fujimori Y., Komiyama M., Tashiro H., Tanigami A., Fujiwara T., Ono T., Yamada K., Fujii Y., Ozaki K., Hirao M., Ohmori Y., Kawabata A., Hikiji T., Kobatake N., Inagaki H., Ikema Y., Okamoto S., Okitani R., Kawakami T., Noguchi S., Itoh T., Shigeta K., Senba T., Matsumura K., Nakajima Y., Mizuno T., Morinaga M., Sasaki M., Togashi T., Oyama M., Hata H., Watanabe M., Komatsu T., Mizushima-Sugano J., Satoh T., Shirai Y., Takahashi Y., Nakagawa K., Okumura K., Nagase T., Nomura N., Kikuchi H., Masuho Y., Yamashita R., Nakai K., Yada T., Nakamura Y., Ohara O., Isogai T., Sugano S.
Nat. Genet. 36:40-45(2004) [PubMed: 14702039] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANT TYR-493.
Tissue: Cerebellum.
[4]"The status, quality, and expansion of the NIH full-length cDNA project: the Mammalian Gene Collection (MGC)."
The MGC Project Team
Genome Res. 14:2121-2127(2004) [PubMed: 15489334] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA], VARIANTS CYS-149; MET-279 AND TYR-493.
[5]"A missense mutation in the type II hair keratin hHb3 is associated with monilethrix."
van Steensel M.A., Steijlen P.M., Bladergroen R.S., Vermeer M., van Geel M.
J. Med. Genet. 42:E19-E19(2005) [PubMed: 15744029] [Abstract]
Cited for: VARIANT MONILETHRIX LYS-407.
+Additional computationally mapped references.

Web resources

Cross-references

Sequence databases

X99141 mRNA. Translation: CAA67578.1.
Y19208 Genomic DNA. Translation: CAB76828.1.
AK314904 mRNA. Translation: BAG37418.1.
BC069546 mRNA. Translation: AAH69546.1.
BC128063 mRNA. Translation: AAI28064.1.
IPIIPI00297795.
RefSeqNP_002273.3.
UniGeneHs.714972

3D structure databases

HSSPHSSP built from PDB template 1GK7 based on UniProtKB P08670.
ModBaseSearch...

Proteomic databases

PeptideAtlasP78385.

Genome annotation databases

EnsemblENSG00000170523. Homo sapiens. [Contig view]
GeneID3889.

Organism-specific databases

GeneCardsGC12M050995.
GC12M050996.
H-InvDBHIX0036826.
HGNCHGNC:6460. KRT83.
HPACAB004987.
MIM158000. phenotype.
602765. gene.
Orphanet573. Monilethrix.
GenAtlasSearch...

Phylogenomic databases

HOVERGENP78385.
OMAP78385. VEAVNVC.

Gene expression databases

ArrayExpressP78385.
BgeeP78385.
GermOnlineENSG00000170523. Homo sapiens.

Family and domain databases

InterProIPR016044. F.
IPR001664. IF.
IPR018039. Intermediate_filament_CS.
IPR003054. Keratin_II.
[Graphical view]
PANTHERPTHR23239. IF. 1 hit.
PTHR23239:SF18. Keratin_II. 1 hit.
PfamPF00038. Filament. 1 hit.
[Graphical view]
PRINTSPR01276. TYPE2KERATIN.
PROSITEPS00226. IF. 1 hit.
[Graphical view]
ProtoNetSearch...

Other Resources

SOURCESearch...

Entry information

Entry nameKRT83_HUMAN
AccessionPrimary (citable) accession number: P78385
Secondary accession number(s): A1A4S9 expand/collapse secondary AC list , B2RC21, Q6NT21, Q9NSB3
Entry history
Integrated into UniProtKB/Swiss-Prot: March 29, 2004
Last sequence update: December 16, 2008
Last modified: July 7, 2009
This is version 72 of the entry and version 2 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation projectHPI (Human Proteome Initiative)

Relevant documents

Human chromosome 12

Human chromosome 12: entries, gene names and cross-references to MIM

Human entries with polymorphisms or disease mutations

List of human entries with polymorphisms or disease mutations

Human polymorphisms and disease mutations

Index of human polymorphisms and disease mutations

MIM cross-references

Online Mendelian Inheritance in Man (MIM) cross-references in UniProtKB/Swiss-Prot

SIMILARITY comments

Index of protein domains and families

Names and origin · Protein attributes · General annotation (Comments) · Ontologies · Sequence annotation (Features) · Sequences · References · Web resources · Cross-references · Entry information · Relevant documents