purF

Functionⁱ

Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.UniRule annotation

Catalytic activityⁱ

5-phospho-beta-D-ribosylamine + diphosphate + L-glutamate = L-glutamine + 5-phospho-alpha-D-ribose 1-diphosphate + H₂O.UniRule annotation

Pathwayⁱ: IMP biosynthesis via de novo pathway

This protein is involved in step 1 of the subpathway that synthesizes N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-alpha-D-ribose 1-diphosphate.UniRule annotation
Proteins known to be involved in the 2 steps of the subpathway in this organism are:

Amidophosphoribosyltransferase (purF)
Phosphoribosylamine--glycine ligase (purD)

This subpathway is part of the pathway IMP biosynthesis via de novo pathway, which is itself part of Purine metabolism.
View all proteins of this organism that are known to be involved in the subpathway that synthesizes N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-alpha-D-ribose 1-diphosphate, the pathway IMP biosynthesis via de novo pathway and in Purine metabolism.

Sites

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Active siteⁱ	22	NucleophileUniRule annotation		1

GO - Molecular functionⁱ

amidophosphoribosyltransferase activity Source: UniProtKB-EC

Complete GO annotation...

GO - Biological processⁱ

'de novo' IMP biosynthetic process Source: UniProtKB-UniPathway
glutamine metabolic process Source: UniProtKB-KW
nucleoside metabolic process Source: InterPro
purine nucleobase biosynthetic process Source: InterPro

Complete GO annotation...

Keywordsⁱ

Molecular function	Glycosyltransferase, Transferase
Biological process	Purine biosynthesis

Enzyme and pathway databases

UniPathwayⁱ	UPA00074; UER00124.

UniPathwayⁱ

UPA00074; UER00124.

Protein family/group databases

MEROPS protease database More...MEROPSⁱ	C44.001.

MEROPSⁱ

C44.001.

Names & Taxonomyⁱ

Protein namesⁱ	Recommended name: AmidophosphoribosyltransferaseUniRule annotation (EC:2.4.2.14UniRule annotation) Short name: ATaseUniRule annotation Alternative name(s): Glutamine phosphoribosylpyrophosphate amidotransferaseUniRule annotation Short name: GPATaseUniRule annotation
Gene namesⁱ	Name:purFUniRule annotation Ordered Locus Names:RHE_CH01428
Organismⁱ	Rhizobium etli (strain CFN 42 / ATCC 51251)
Taxonomic identifierⁱ	347834 [NCBI]
Taxonomic lineageⁱ	cellular organisms › Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Rhizobium › Rhizobium etli
Proteomesⁱ	UP000001936 Componentⁱ: Chromosome

PTM / Processingⁱ

Molecule processing

Feature key	Position(s)	DescriptionActions	Graphical view	Length
PropeptideⁱPRO_0000029261	1 – 21	By similarityAdd BLAST		21
ChainⁱPRO_0000029262	22 – 496	AmidophosphoribosyltransferaseAdd BLAST		475

Interactionⁱ

Protein-protein interaction databases

STRINGⁱ	347834.RHE_CH01428.

STRINGⁱ

347834.RHE_CH01428.

Structureⁱ

3D structure databases

ProteinModelPortalⁱ	P77935.
SMRⁱ	P77935.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Family & Domainsⁱ

Domains and Repeats

Feature key	Position(s)	DescriptionActions	Graphical view	Length
Domainⁱ	22 – 241	Glutamine amidotransferase type-2UniRule annotationAdd BLAST		220

Sequence similaritiesⁱ

In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.UniRule annotation

Keywords - Domainⁱ

Glutamine amidotransferase

Phylogenomic databases

eggNOGⁱ	ENOG4105CBA. Bacteria. COG0034. LUCA.
HOGENOMⁱ	HOG000033688.
KEGG Orthology (KO) More...KOⁱ	K00764.
OMAⁱ	HVYFARP.

Family and domain databases

Conserved Domains Database More...CDDⁱ	cd00715. GPATase_N. 1 hit. cd06223. PRTases_typeI. 1 hit.
Gene3Dⁱ	3.60.20.10. 2 hits.
HAMAPⁱ	MF_01931. PurF. 1 hit.
InterProⁱ	View protein in InterPro IPR017932. GATase_2_dom. IPR029055. Ntn_hydrolases_N. IPR000836. PRibTrfase_dom. IPR029057. PRTase-like. IPR005854. PurF. IPR035584. PurF_N.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF13537. GATase_7. 1 hit. PF00156. Pribosyltran. 1 hit.
PIRSFⁱ	PIRSF000485. Amd_phspho_trans. 1 hit.
SUPFAMⁱ	SSF53271. SSF53271. 1 hit. SSF56235. SSF56235. 1 hit.
TIGRFAMsⁱ	TIGR01134. purF. 1 hit.
PROSITEⁱ	View protein in PROSITE PS51278. GATASE_TYPE_2. 1 hit. PS00103. PUR_PYR_PR_TRANSFER. 1 hit.

Sequenceⁱ

Sequence statusⁱ: Complete.

Sequence processingⁱ: The displayed sequence is further processed into a mature form.

P77935-1 [UniParc]FASTA Add to basket

« Hide

        10         20         30         40         50
MNQSHSFPTD DPLDGDTLHE ECGVFGILGH PDAAALTALG LHALQHRGQE 
        60         70         80         90        100
AAGIVSFDGK RFYQERHMGL VGDHYTNPMT LARLPGSISI GHTRYSTTGE 
       110        120        130        140        150
VAMRNVQPLF AELEEGGIAI AHNGNFTNGL TLRRQIIATG AICQSTSDTE 
       160        170        180        190        200
VVLHLIARSR HASTSDRFID AIRQMEGGYS MLAMTRTKLI AARDPTGIRP 
       210        220        230        240        250
LVMGELDGKP IFCSETCALD IIGAKFIRDV ENGEVIICEI QPDGSISIDA 
       260        270        280        290        300
RKPSKPQPER LCLFEYVYFA RPDSVVGGRN VYTTRKNMGM NLAKESPVDA 
       310        320        330        340        350
DVVVPVPDGG TPAALGYAQE SGIPFEYGII RNHYVGRTFI EPTQQIRAFG 
       360        370        380        390        400
VKLKHSANRA MIEGKRVVLV DDSIVRGTTS LKIVQMIREA GAREVHIRVA 
       410        420        430        440        450
SPMIFFPDFY GIDTPDADKL LANQYADVEA MAKYIGADSL AFLSINGLYR 
       460        470        480        490 
AVGGEDRNPA RPQFTDHYFT GDYPTRLLDK NGESMGNKLS MLASNG

Length:496

Mass (Da):54,162

Last modified:September 21, 2011 - v2

Checksum:ⁱEA8F1F6F9189915C

GO

Experimental Info

Feature key	Position(s)	DescriptionActions	Length
Sequence conflictⁱ	193 – 194	RD → SH in AAB06461 (Ref. 1) Curated	2
Sequence conflictⁱ	312	P → S in AAB06461 (Ref. 1) Curated	1
Sequence conflictⁱ	315	L → G in AAB06461 (Ref. 1) Curated	1
Sequence conflictⁱ	327	Y → YEY in AAB06461 (Ref. 1) Curated	1
Sequence conflictⁱ	407	P → R in AAB06461 (Ref. 1) Curated	1
Sequence conflictⁱ	412 – 417	IDTPDA → SIRPTP in AAB06461 (Ref. 1) Curated	6

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	U65392 Genomic DNA. Translation: AAB06461.1. CP000133 Genomic DNA. Translation: ABC90231.1.
NCBI Reference Sequences More...RefSeqⁱ	WP_011424763.1. NC_007761.1.

Genome annotation databases

EnsemblBacteriaⁱ	ABC90231; ABC90231; RHE_CH01428.
GeneIDⁱ	24299557.
KEGGⁱ	ret:RHE_CH01428.

Similar proteinsⁱ

Entry	Cluster members	Organisms	Length	Cluster ID	Cluster name	Size
P77935	S5S1Q5	Rhizobium etli (strain CFN 42 / ATCC 51251) Rhizobium etli bv. mimosae str. Mim1	496	UniRef100_P77935	Cluster: Amidophosphoribosyltransferase	2

Entry	Cluster members	Organisms	Length	Cluster ID	Cluster name	Size
P77935	S5S1Q5 A0A1S9F001 A0A1B9V8N5 A0A1G5CZE7 A0A1S7Q0F7 M8ACJ8 A0A1S7TMA7 A0A1S7PQE6 A0A0X8J2V5 K5BX29 +111	Rhizobium etli (strain CFN 42 / ATCC 51251) Rhizobium etli bv. mimosae str. Mim1 Agrobacterium sp. YIC 5082 Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter) Rhizobium sp. NFACC06-2 Agrobacterium genomosp. 7 str. RV3 Agrobacterium tumefaciens str. Cherry 2E-2-2 Agrobacterium genomosp. 7 str. NCPPB 1641 Agrobacterium genomosp. 7 str. Zutra 3/1 Bradyrhizobium lupini HPC(L) And more	496	UniRef90_P77935	Cluster: Amidophosphoribosyltransferase	122

Entry	Cluster members	Organisms	Length	Cluster ID	Cluster name	Size
P77935	S5S1Q5 UPI00076144D9 UPI000B4014C7 A0A098RY00 A0A0L6K1H0 A0A178H9U7 A0A0X7A3B6 A0A118KBJ4 W1LBQ9 UPI00049EED46 +1179	Rhizobium etli (strain CFN 42 / ATCC 51251) Rhizobium etli bv. mimosae str. Mim1 Rhizobium radiobacter (Agrobacterium tumefaciens) (Agrobacterium radiobacter) Rhizobium sp. H41 Agrobacterium sp. SUL3 Agrobacterium rhizogenes Agrobacterium sp. LY4 Agrobacterium sp. D14 Agrobacterium radiobacter DSM 30147 Agrobacterium genomosp. 9 str. Hayward 0363 And more	496	UniRef50_P77935	Cluster: Amidophosphoribosyltransferase	1,190

Cross-referencesⁱ

Sequence databases

Select the link destinations: EMBLⁱ GenBankⁱ DDBJⁱ Links Updated	U65392 Genomic DNA. Translation: AAB06461.1. CP000133 Genomic DNA. Translation: ABC90231.1.
NCBI Reference Sequences More...RefSeqⁱ	WP_011424763.1. NC_007761.1.

3D structure databases

ProteinModelPortalⁱ	P77935.
SMRⁱ	P77935.
ModBaseⁱ	Search...
MobiDBⁱ	Search...

Protein-protein interaction databases

STRINGⁱ	347834.RHE_CH01428.

STRINGⁱ

347834.RHE_CH01428.

Protein family/group databases

MEROPS protease database More...MEROPSⁱ	C44.001.

MEROPSⁱ

C44.001.

Protocols and materials databases

Structural Biology Knowledgebase	Search...

Structural Biology Knowledgebase

Search...

Genome annotation databases

EnsemblBacteriaⁱ	ABC90231; ABC90231; RHE_CH01428.
GeneIDⁱ	24299557.
KEGGⁱ	ret:RHE_CH01428.

Phylogenomic databases

eggNOGⁱ	ENOG4105CBA. Bacteria. COG0034. LUCA.
HOGENOMⁱ	HOG000033688.
KEGG Orthology (KO) More...KOⁱ	K00764.
OMAⁱ	HVYFARP.

Enzyme and pathway databases

UniPathwayⁱ	UPA00074; UER00124.

UniPathwayⁱ

UPA00074; UER00124.

Family and domain databases

Conserved Domains Database More...CDDⁱ	cd00715. GPATase_N. 1 hit. cd06223. PRTases_typeI. 1 hit.
Gene3Dⁱ	3.60.20.10. 2 hits.
HAMAPⁱ	MF_01931. PurF. 1 hit.
InterProⁱ	View protein in InterPro IPR017932. GATase_2_dom. IPR029055. Ntn_hydrolases_N. IPR000836. PRibTrfase_dom. IPR029057. PRTase-like. IPR005854. PurF. IPR035584. PurF_N.
Pfam protein domain database More...Pfamⁱ	View protein in Pfam PF13537. GATase_7. 1 hit. PF00156. Pribosyltran. 1 hit.
PIRSFⁱ	PIRSF000485. Amd_phspho_trans. 1 hit.
SUPFAMⁱ	SSF53271. SSF53271. 1 hit. SSF56235. SSF56235. 1 hit.
TIGRFAMsⁱ	TIGR01134. purF. 1 hit.
PROSITEⁱ	View protein in PROSITE PS51278. GATASE_TYPE_2. 1 hit. PS00103. PUR_PYR_PR_TRANSFER. 1 hit.
ProtoNetⁱ	Search...

Entry informationⁱ

Entry nameⁱ	PUR1_RHIEC
Accessionⁱ	P77935Primary (citable) accession number: P77935 Secondary accession number(s): Q2KAA5
Entry historyⁱ	Integrated into UniProtKB/Swiss-Prot:	November 1, 1997
	Last sequence update:	September 21, 2011
	Last modified:	August 30, 2017
	This is version 104 of the entry and version 2 of the sequence. See complete history.
Entry statusⁱ	Reviewed (UniProtKB/Swiss-Prot)
Annotation program	Prokaryotic Protein Annotation Program

UniProtKB

UniParc

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UniRef

Proteomes

Annotation systems

Supporting data

UniProtKB - P77935 (PUR1_RHIEC)

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Amidophosphoribosyltransferase

Select a section on the left to see content.

<p>This section provides any useful information about the protein, mostly biological knowledge.<p><a href='/help/function_section' target='_top'>More...</a></p>Functioni

<p>This subsection of the <a href="http://www.uniprot.org/help/function_section">‘Function’</a> section describes the metabolic pathway(s) associated with a protein.<p><a href='/help/pathway' target='_top'>More...</a></p>Pathwayi: IMP biosynthesis via de novo pathway

Sites

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Molecular functioni

<p>The <a href="http://www.geneontology.org/">Gene Ontology (GO)</a> project provides a set of hierarchical controlled vocabulary split into 3 categories:<p><a href='/help/gene_ontology' target='_top'>More...</a></p>GO - Biological processi

Enzyme and pathway databases

Protein family/group databases

<p>This section provides information about the protein and gene name(s) and synonym(s) and about the organism that is the source of the protein sequence.<p><a href='/help/names_and_taxonomy_section' target='_top'>More...</a></p>Names & Taxonomyi

<p>This section describes post-translational modifications (PTMs) and/or processing events.<p><a href='/help/ptm_processing_section' target='_top'>More...</a></p>PTM / Processingi

Molecule processing

<p>This section provides information on the quaternary structure of a protein and on interaction(s) with other proteins or protein complexes.<p><a href='/help/interaction_section' target='_top'>More...</a></p>Interactioni

Protein-protein interaction databases

<p>This section provides information on the tertiary and secondary structure of a protein.<p><a href='/help/structure_section' target='_top'>More...</a></p>Structurei

3D structure databases

<p>This section provides information on sequence similarities with other proteins and the domain(s) present in a protein.<p><a href='/help/family_and_domains_section' target='_top'>More...</a></p>Family & Domainsi

Domains and Repeats

<p>This subsection of the ‘Family and domains’ section provides information about the sequence similarity with other proteins.<p><a href='/help/sequence_similarities' target='_top'>More...</a></p>Sequence similaritiesi

Phylogenomic databases

Family and domain databases

<p>This section displays by default the canonical protein sequence and upon request all isoforms described in the entry. It also includes information pertinent to the sequence(s), including length and molecular weight.<p><a href='/help/sequences_section' target='_top'>More...</a></p>Sequencei

Experimental Info

Sequence databases

Genome annotation databases

<p>This section is used to point to information related to entries and found in data collections other than UniProtKB.<p><a href='/help/cross_references_section' target='_top'>More...</a></p>Cross-referencesi

Sequence databases

3D structure databases

Protein-protein interaction databases

Protein family/group databases

Protocols and materials databases

Genome annotation databases

Phylogenomic databases

Enzyme and pathway databases

Family and domain databases

<p>This section provides general information on the entry.<p><a href='/help/entry_information_section' target='_top'>More...</a></p>Entry informationi

<p>This section contains any relevant information that doesn’t fit in any other defined sections<p><a href='/help/miscellaneous_section' target='_top'>More...</a></p>Miscellaneousi

Documents

Functionⁱ

Pathwayⁱ: IMP biosynthesis via de novo pathway

GO - Molecular functionⁱ

GO - Biological processⁱ

Names & Taxonomyⁱ

PTM / Processingⁱ

Interactionⁱ

Structureⁱ

Family & Domainsⁱ

Sequence similaritiesⁱ

Sequenceⁱ

Cross-referencesⁱ

Entry informationⁱ

Miscellaneousⁱ