Unreviewed, UniProtKB/TrEMBL P77853 (P77853_DICTH)

Names and origin

Protein names

Recommended name:
    Endo-1,4-beta-xylanase RuleBase RU004392V0
    EC=3.2.1.8

Gene names

Name:

xynB EMBL AAC46361.1

Organism

Dictyoglomus thermophilum EMBL AAC46361.1

Taxonomic identifier

14 [NCBI]

Taxonomic lineage

Bacteria › Dictyoglomi › Dictyoglomales › Dictyoglomaceae › Dictyoglomus

Protein attributes

Sequence length	360 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is not processed.
Protein existence	Evidence at protein level.

General annotation (Comments)

Catalytic activity	Endohydrolysis of (1->4)-beta-D-xylosidic linkages in xylans. RuleBase RU004392V0
Pathway	Glycan degradation; xylan degradation. RuleBase RU004392V0
Sequence similarities	Belongs to the glycosyl hydrolase 11 (cellulase G) family. RuleBase RU003433V0

Ontologies

Keywords
Biological process	Xylan degradation RuleBase RU003433V0
Molecular function	Glycosidase RuleBase RU003433V0 Hydrolase
Gene Ontology (GO)
Biological process	xylan catabolic process Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	carbohydrate binding Inferred from electronic annotation. Source: InterPro endo-1,4-beta-xylanase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequences

	Sequence		Length	Mass (Da)
	P77853-1 [UniParc]. Last modified February 1, 1997. Version 1. Checksum: C7909E007FA58AEE	FASTA	360	39,788
	10 20 30 40 50 60 MFLKKLSKLL LVVLLVAVYT QVNAQTSITL TSNASGTFDG YYYELWKDTG NTTMTVYTQG 70 80 90 100 110 120 RFSCQWSNIN NALFRTGKKY NQNWQSLGTI RITYSATYNP NGNSYLCIYG WSTNPLVEFY 130 140 150 160 170 180 IVESWGNWRP PGATSLGQVT IDGGTYDIYR TTRVNQPSIV GTATFDQYWS VRTSKRTSGT 190 200 210 220 230 240 VTVTDHFRAW ANRGLNLGTI DQITLCVEGY QSSGSANITQ NTFSQGSSSG SSGGSSGSTT 250 260 270 280 290 300 TTRIECENMS LSGPYVSRIT NPFNGIALYA NGDTARATVN FPASRNYNFR LRGCGNNNNL 310 320 330 340 350 360 ARVDLRIDGR TVGTFYYQGT YPWEAPIDNV YVSAGSHTVE ITVTADNGTW DVYADYLVIQ

References

[1]	"Cloning of the xynB gene from Dictyoglomus thermophilum Rt46B.1 and action of the gene product on kraft pulp." Morris D.D., Gibbs M.D., Chin C.W., Koh M.H., Wong K.K., Allison R.W., Nelson P.J., Bergquist P.L. Appl. Environ. Microbiol. 64:1759-1765(1998) [PubMed: 9572948] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: Rt46B.1 EMBL AAC46361.1.
[2]	"Structure of XynB, a highly thermostable beta-1,4-xylanase from Dictyoglomus thermophilum Rt46B.1, at 1.8 A resolution." McCarthy A.A., Morris D.D., Bergquist P.L., Baker E.N. Acta Crystallogr. D Biol. Crystallogr. 56:1367-1375(2000) [PubMed: 11053833] [Abstract] Cited for: X-RAY CRYSTALLOGRAPHY (1.8 ANGSTROMS) OF 30-227.

Cross-references

Sequence databases

EMBLGenBankDDBJ

U76545 Genomic DNA. Translation: AAC46361.1.

3D structure databases

PDBPDBe

Entry	Method	Resolution (Å)	Chain	Positions	PDBsum
1F5J	X-ray	1.80	A/B	30-225	[»]

ModBase

Search...

Protein family/group databases

CAZy

CBM36. Carbohydrate-Binding Module Family 36.
GH11. Glycoside Hydrolase Family 11.

Family and domain databases

InterPro

IPR005084. CBM_6.
IPR001137. Glyco_hydro_11.
IPR013319. Glyco_hydro_11/12_cat.
IPR018208. Glyco_hydro_11_AS.
[Graphical view]

Gene3D

G3DSA:2.60.120.180. Glyco_hydro_11/12_cat. 1 hit.

Pfam

PF03422. CBM_6. 1 hit.
PF00457. Glyco_hydro_11. 1 hit.
[Graphical view]

PRINTS

PR00911. GLHYDRLASE11.

PROSITE

PS51175. CBM6. 1 hit.
PS00776. GLYCOSYL_HYDROL_F11_1. 1 hit.
PS00777. GLYCOSYL_HYDROL_F11_2. 1 hit.
[Graphical view]

ProtoNet

Search...

Entry information

Entry name

P77853_DICTH

Accession

Primary (citable) accession number: P77853

Entry history

Integrated into UniProtKB/TrEMBL:	February 1, 1997
Last sequence update:	February 1, 1997
Last modified:	June 16, 2009
This is version 49 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)