P77818 (P77818_AGRVI) Unreviewed, UniProtKB/TrEMBL

Names and origin

Protein names

Submitted name:
Endo-polygalacturonase EMBL AAB51699.1
EC=3.2.1.15 EMBL AAB51699.1

Gene names

Name:

pehA EMBL AAB51699.1

Organism

Agrobacterium vitis (Rhizobium vitis) EMBL AAB51699.1

Taxonomic identifier

373 [NCBI]

Taxonomic lineage

Bacteria › Proteobacteria › Alphaproteobacteria › Rhizobiales › Rhizobiaceae › Rhizobium/Agrobacterium group › Agrobacterium

Protein attributes

Sequence length	549 AA.
Sequence status	Complete.
Sequence processing	The displayed sequence is further processed into a mature form.
Protein existence	Inferred from homology

General annotation (Comments)

Sequence similarities

Belongs to the glycosyl hydrolase 28 family. RuleBase RU000404

Ontologies

Keywords
Biological process	Cell wall biogenesis/degradation RuleBase RU000404
Domain	Signal EMBL AAB51699.1
Molecular function	Glycosidase RuleBase RU000404 EMBL AAB51699.1 Hydrolase
Gene Ontology (GO)
Biological process	carbohydrate metabolic process Inferred from electronic annotation. Source: InterPro cellular cell wall organization Inferred from electronic annotation. Source: UniProtKB-KW
Molecular function	polygalacturonase activity Inferred from electronic annotation. Source: EC
Complete GO annotation...

Sequence annotation (Features)

	Feature key	Position(s)	Length	Description	Graphical view	Feature identifier
Molecule processing
	Signal peptide	1 – 34	34	Potential EMBL AAB51699.1
	Chain	35 – 549	515	endo-polygalacturonase EMBL AAB51699.1		PRO_5000145154

Sequences

	Sequence		Length	Mass (Da)
	P77818 [UniParc]. Last modified February 1, 1997. Version 1. Checksum: BC8A97A3BA789751	FASTA	549	58,022
	10 20 30 40 50 60 MPGPVFARLF QRSALGRMLG AVALCALTPV AAWAAEPAVA TQWGAVTVPE APSSLCATLT 70 80 90 100 110 120 AGLTAKDGSL DPADADGKSP HPDQMRLQAA IDGCAGGAVK LVPGAEGQDA FLSGPLSLKS 130 140 150 160 170 180 GVVLWIDKGV TLFASRDPKD YDSGAGDCGT ANSSSTKTCK PLIMAKDTKG SGIVGEGKID 190 200 210 220 230 240 GRGGSLLLSG DNAGKRSWWD VAWQSKQGLI QHVFRLVEID GGEDFTLHRI TLLNSPNFHV 250 260 270 280 290 300 VSNGVTGLTA WGIKILSPSA VYTRPDYACP PETTPDKLTP ATCFTPDTVK NTDGFDPGQS 310 320 330 340 350 360 SKVVLAYSAI STGDDHVAIK AGGDKPSTRM TFAHNRFYYG HGMSVGSETD AGVDGIHVYD 370 380 390 400 410 420 LVMDGHDSPN GNGLRIKSDT SRGGKVTNVL YEDVCMRNVA FPLVFDTRYS DKTGDRIPDF 430 440 450 460 470 480 SGITVRNLRY TGSTTGSGGH VVLRGIRDDA HYQPLGLFLD TIQFDGAQPL LVGSADPAEK 490 500 510 520 530 540 DPPLNAHVTL GPGPVSFSDL LKADPARRVK TVNLVDTSEE DPVPPLDCSS AFVPFSSFWR ARRFERIVS

References

[1]	"Characterization of the Agrobacterium vitis pehA gene and comparison of the encoded polygalacturonase with the homologous enzymes from Erwinia carotovora and Ralstonia solanacearum." Herlache T.C., Hotchkiss A.T. Jr, Burr T.J., Collmer A. Appl. Environ. Microbiol. 63:338-346(1997) [PubMed: 8979363] [Abstract] Cited for: NUCLEOTIDE SEQUENCE. Strain: CG49 EMBL AAB51699.1.
+	Additional computationally mapped references.

Cross-references

Sequence databases
EMBL GenBank DDBJ	U73161 Genomic DNA. Translation: AAB51699.1.
3D structure databases
HSSP	HSSP built from PDB template 1BHE based on UniProtKB P26509.
ProteinModelPortal	P77818.
ModBase	Search...
Protein family/group databases
CAZy	GH28. Glycoside Hydrolase Family 28.
Protocols and materials databases
StructuralBiologyKnowledgebase	Search...
Family and domain databases
InterPro	IPR000743. Glyco_hydro_28. IPR012334. Pectin_lyas_fold. IPR011050. Pectin_lyase_fold/virulence. [Graphical view]
Gene3D	G3DSA:2.160.20.10. Pectin_lyas_fold. 1 hit.
Pfam	PF00295. Glyco_hydro_28. 1 hit. [Graphical view]
SUPFAM	SSF51126. Pectin_lyas_like. 1 hit.
PROSITE	PS00502. POLYGALACTURONASE. 1 hit. [Graphical view]
ProtoNet	Search...

Entry information

Entry name

P77818_AGRVI

Accession

Primary (citable) accession number: P77818

Entry history

Integrated into UniProtKB/TrEMBL:	February 1, 1997
Last sequence update:	February 1, 1997
Last modified:	April 5, 2011
This is version 57 of the entry and version 1 of the sequence. [Complete history]

Entry status

Unreviewed (UniProtKB/TrEMBL)