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Protein

Uncharacterized ABC transporter ATP-binding protein YdcT

Gene

ydcT

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Probably part of the ABC transporter complex YdcSTUV. Probably responsible for energy coupling to the transport system.Curated

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi37 – 44ATPPROSITE-ProRule annotation8

GO - Molecular functioni

Keywordsi

Biological processTransport
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciEcoCyc:YDCT-MONOMER
MetaCyc:YDCT-MONOMER

Protein family/group databases

TCDBi3.A.1.11.9 the atp-binding cassette (abc) superfamily

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized ABC transporter ATP-binding protein YdcTCurated
Gene namesi
Name:ydcT
Ordered Locus Names:b1441, JW1436
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13763 ydcT

Subcellular locationi

GO - Cellular componenti

Pathology & Biotechi

Disruption phenotypei

Inactivation of the gene does not significantly affect natural transformation.1 Publication

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000931621 – 337Uncharacterized ABC transporter ATP-binding protein YdcTAdd BLAST337

Proteomic databases

EPDiP77795
PaxDbiP77795
PRIDEiP77795

Interactioni

Protein-protein interaction databases

BioGridi426018984 interactors.
STRINGi316385.ECDH10B_1571

Structurei

3D structure databases

ProteinModelPortaliP77795
SMRiP77795
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini5 – 235ABC transporterPROSITE-ProRule annotationAdd BLAST231

Sequence similaritiesi

Belongs to the ABC transporter superfamily.Curated

Phylogenomic databases

eggNOGiENOG4105C53 Bacteria
COG3842 LUCA
InParanoidiP77795
KOiK02052
OMAiPFSIRPE
PhylomeDBiP77795

Family and domain databases

InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR003439 ABC_transporter-like
IPR017871 ABC_transporter_CS
IPR008995 Mo/tungstate-bd_C_term_dom
IPR027417 P-loop_NTPase
IPR013611 Transp-assoc_OB_typ2
PfamiView protein in Pfam
PF00005 ABC_tran, 1 hit
PF08402 TOBE_2, 1 hit
SMARTiView protein in SMART
SM00382 AAA, 1 hit
SUPFAMiSSF50331 SSF50331, 1 hit
SSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS00211 ABC_TRANSPORTER_1, 1 hit
PS50893 ABC_TRANSPORTER_2, 1 hit

Sequencei

Sequence statusi: Complete.

P77795-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTYAVEFDNV SRLYGDVRAV DGVSIAIKDG EFFSMLGPSG SGKTTCLRLI
60 70 80 90 100
AGFEQLSGGA ISIFGKPASN LPPWERDVNT VFQDYALFPH MSILDNVAYG
110 120 130 140 150
LMVKGVNKKQ RHAMAQEALE KVALGFVHQR KPSQLSGGQR QRVAIARALV
160 170 180 190 200
NEPRVLLLDE PLGALDLKLR EQMQLELKKL QQSLGITFIF VTHDQGEALS
210 220 230 240 250
MSDRVAVFNN GRIEQVDSPR DLYMRPRTPF VAGFVGTSNV FDGLMAEKLC
260 270 280 290 300
GMTGSFALRP EHIRLNTPGE LQANGTIQAV QYQGAATRFE LKLNGGEKLL
310 320 330
VSQANMTGEE LPATLTPGQQ VMVSWSRDVM VPLVEER
Length:337
Mass (Da):37,041
Last modified:February 1, 1997 - v1
Checksum:iFAA179089645F114
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC74523.1
AP009048 Genomic DNA Translation: BAA15070.1
PIRiD64896
RefSeqiNP_415958.1, NC_000913.3
WP_000220396.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74523; AAC74523; b1441
BAA15070; BAA15070; BAA15070
GeneIDi946007
KEGGiecj:JW1436
eco:b1441
PATRICifig|1411691.4.peg.827

Similar proteinsi

Entry informationi

Entry nameiYDCT_ECOLI
AccessioniPrimary (citable) accession number: P77795
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: April 25, 2018
This is version 129 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome