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Protein

Uncharacterized fimbrial-like protein YdeS

Gene

ydeS

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G6794-MONOMER.
ECOL316407:JW1498-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized fimbrial-like protein YdeS
Gene namesi
Name:ydeS
Ordered Locus Names:b1504, JW1498
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13801. ydeS.

Subcellular locationi

GO - Cellular componenti

  • pilus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Fimbrium

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2222Sequence analysisAdd
BLAST
Chaini23 – 176154Uncharacterized fimbrial-like protein YdeSPRO_0000009259Add
BLAST

Amino acid modifications

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Disulfide bondi38 ↔ 78Curated

Keywords - PTMi

Disulfide bond

Proteomic databases

PaxDbiP77789.
PRIDEiP77789.

Interactioni

Protein-protein interaction databases

BioGridi4263156. 3 interactions.
STRINGi511145.b1504.

Structurei

3D structure databases

ProteinModelPortaliP77789.
SMRiP77789. Positions 23-176.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the fimbrial protein family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4108WDE. Bacteria.
ENOG4111P69. LUCA.
HOGENOMiHOG000260127.
InParanoidiP77789.
OMAiSARMKST.
PhylomeDBiP77789.

Family and domain databases

Gene3Di2.60.40.1090. 1 hit.
InterProiIPR008966. Adhesion_dom.
IPR000259. Adhesion_dom_fimbrial.
[Graphical view]
PfamiPF00419. Fimbrial. 1 hit.
[Graphical view]
SUPFAMiSSF49401. SSF49401. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P77789-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKYNNIIFLG LCLGLTTYSA LSADSVIKIS GRVLDYGCTV SSDSLNFTVD
60 70 80 90 100
LQKNSARQFP TTGSTSPAVP FQITLSECSK GTTGVRVAFN GIEDAENNTL
110 120 130 140 150
LKLDEGSNTA SGLGIEILDA NMRPVKLNDL HAGMQWIPLV PEQNNILPYS
160 170
ARLKSTQKSV NPGLVRASAT FTLEFQ
Length:176
Mass (Da):18,949
Last modified:February 1, 1997 - v1
Checksum:i55B60EA6C45C8CB5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74577.1.
AP009048 Genomic DNA. Translation: BAA15177.1.
PIRiC64904.
RefSeqiNP_416021.1. NC_000913.3.
WP_000876763.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74577; AAC74577; b1504.
BAA15177; BAA15177; BAA15177.
GeneIDi946047.
KEGGiecj:JW1498.
eco:b1504.
PATRICi32118304. VBIEscCol129921_1572.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74577.1.
AP009048 Genomic DNA. Translation: BAA15177.1.
PIRiC64904.
RefSeqiNP_416021.1. NC_000913.3.
WP_000876763.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP77789.
SMRiP77789. Positions 23-176.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4263156. 3 interactions.
STRINGi511145.b1504.

Proteomic databases

PaxDbiP77789.
PRIDEiP77789.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74577; AAC74577; b1504.
BAA15177; BAA15177; BAA15177.
GeneIDi946047.
KEGGiecj:JW1498.
eco:b1504.
PATRICi32118304. VBIEscCol129921_1572.

Organism-specific databases

EchoBASEiEB3562.
EcoGeneiEG13801. ydeS.

Phylogenomic databases

eggNOGiENOG4108WDE. Bacteria.
ENOG4111P69. LUCA.
HOGENOMiHOG000260127.
InParanoidiP77789.
OMAiSARMKST.
PhylomeDBiP77789.

Enzyme and pathway databases

BioCyciEcoCyc:G6794-MONOMER.
ECOL316407:JW1498-MONOMER.

Miscellaneous databases

PROiP77789.

Family and domain databases

Gene3Di2.60.40.1090. 1 hit.
InterProiIPR008966. Adhesion_dom.
IPR000259. Adhesion_dom_fimbrial.
[Graphical view]
PfamiPF00419. Fimbrial. 1 hit.
[Graphical view]
SUPFAMiSSF49401. SSF49401. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYDES_ECOLI
AccessioniPrimary (citable) accession number: P77789
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: February 1, 1997
Last modified: September 7, 2016
This is version 105 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.