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Protein

Putative ankyrin repeat protein YahD

Gene

yahD

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6183-MONOMER.
ECOL316407:JW0310-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative ankyrin repeat protein YahD
Gene namesi
Name:yahD
Ordered Locus Names:b0318, JW0310
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13588. yahD.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 201201Putative ankyrin repeat protein YahDPRO_0000067237Add
BLAST

Proteomic databases

PaxDbiP77736.

Interactioni

Protein-protein interaction databases

IntActiP77736. 5 interactions.
STRINGi511145.b0318.

Structurei

3D structure databases

ProteinModelPortaliP77736.
SMRiP77736. Positions 11-201.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Repeati5 – 3430ANK 1Add
BLAST
Repeati38 – 6730ANK 2Add
BLAST
Repeati71 – 10030ANK 3Add
BLAST
Repeati104 – 13431ANK 4Add
BLAST
Repeati138 – 17235ANK 5Add
BLAST
Repeati176 – 20126ANK 6Add
BLAST

Sequence similaritiesi

Contains 6 ANK repeats.PROSITE-ProRule annotation

Keywords - Domaini

ANK repeat, Repeat

Phylogenomic databases

eggNOGiENOG4107SNB. Bacteria.
COG0666. LUCA.
HOGENOMiHOG000238058.
InParanoidiP77736.
KOiK06867.
OMAiGNTMAIQ.
PhylomeDBiP77736.

Family and domain databases

Gene3Di1.25.40.20. 1 hit.
InterProiIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
[Graphical view]
PfamiPF12796. Ank_2. 1 hit.
[Graphical view]
SMARTiSM00248. ANK. 6 hits.
[Graphical view]
SUPFAMiSSF48403. SSF48403. 1 hit.
PROSITEiPS50297. ANK_REP_REGION. 1 hit.
PS50088. ANK_REPEAT. 3 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P77736-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSIKNLPADY LLAAQQGDID KVKTCLALGV DINTCDRQGK TAITLASLYQ
60 70 80 90 100
QYACVQALID AGADINKQDH TCLNPFLISC LNDDLTLLRI ILPAKPDLNC
110 120 130 140 150
VTRFGGVGLT PACEKGHLSI VKELLAHTEI NVNQTNHVGW TPLLEAIVLN
160 170 180 190 200
DGGIKQQAIV QLLLEHGASP HLTDKYGKTP LELARERGFE EIAQLLIAAG

A
Length:201
Mass (Da):21,687
Last modified:February 1, 1997 - v1
Checksum:iA90244CEB892E8BD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U73857 Genomic DNA. Translation: AAB18044.1.
U00096 Genomic DNA. Translation: AAC73421.1.
AP009048 Genomic DNA. Translation: BAE76101.1.
PIRiF64758.
RefSeqiNP_414852.1. NC_000913.3.
WP_000023635.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73421; AAC73421; b0318.
BAE76101; BAE76101; BAE76101.
GeneIDi947681.
KEGGiecj:JW0310.
eco:b0318.
PATRICi32115765. VBIEscCol129921_0325.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U73857 Genomic DNA. Translation: AAB18044.1.
U00096 Genomic DNA. Translation: AAC73421.1.
AP009048 Genomic DNA. Translation: BAE76101.1.
PIRiF64758.
RefSeqiNP_414852.1. NC_000913.3.
WP_000023635.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP77736.
SMRiP77736. Positions 11-201.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP77736. 5 interactions.
STRINGi511145.b0318.

Proteomic databases

PaxDbiP77736.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73421; AAC73421; b0318.
BAE76101; BAE76101; BAE76101.
GeneIDi947681.
KEGGiecj:JW0310.
eco:b0318.
PATRICi32115765. VBIEscCol129921_0325.

Organism-specific databases

EchoBASEiEB3358.
EcoGeneiEG13588. yahD.

Phylogenomic databases

eggNOGiENOG4107SNB. Bacteria.
COG0666. LUCA.
HOGENOMiHOG000238058.
InParanoidiP77736.
KOiK06867.
OMAiGNTMAIQ.
PhylomeDBiP77736.

Enzyme and pathway databases

BioCyciEcoCyc:G6183-MONOMER.
ECOL316407:JW0310-MONOMER.

Miscellaneous databases

PROiP77736.

Family and domain databases

Gene3Di1.25.40.20. 1 hit.
InterProiIPR002110. Ankyrin_rpt.
IPR020683. Ankyrin_rpt-contain_dom.
[Graphical view]
PfamiPF12796. Ank_2. 1 hit.
[Graphical view]
SMARTiSM00248. ANK. 6 hits.
[Graphical view]
SUPFAMiSSF48403. SSF48403. 1 hit.
PROSITEiPS50297. ANK_REP_REGION. 1 hit.
PS50088. ANK_REPEAT. 3 hits.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYAHD_ECOLI
AccessioniPrimary (citable) accession number: P77736
Secondary accession number(s): Q2MCA5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: September 7, 2016
This is version 102 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.