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Protein

Inner membrane ABC transporter permease protein YcjP

Gene

ycjP

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Probably part of the binding-protein-dependent transport system YcjNOP. Probably responsible for the translocation of the substrate across the membrane.

GO - Biological processi

Keywordsi

Biological processTransport

Enzyme and pathway databases

BioCyciEcoCyc:YCJP-MONOMER

Protein family/group databases

TCDBi3.A.1.1.46 the atp-binding cassette (abc) superfamily

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane ABC transporter permease protein YcjP
Gene namesi
Name:ycjP
Ordered Locus Names:b1312, JW1305
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13913 ycjP

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 10CytoplasmicSequence analysis10
Transmembranei11 – 31HelicalPROSITE-ProRule annotationAdd BLAST21
Topological domaini32 – 53PeriplasmicSequence analysisAdd BLAST22
Transmembranei54 – 74HelicalPROSITE-ProRule annotationAdd BLAST21
Topological domaini75 – 77CytoplasmicSequence analysis3
Transmembranei78 – 98HelicalPROSITE-ProRule annotationAdd BLAST21
Topological domaini99 – 117PeriplasmicSequence analysisAdd BLAST19
Transmembranei118 – 138HelicalPROSITE-ProRule annotationAdd BLAST21
Topological domaini139 – 140CytoplasmicSequence analysis2
Transmembranei141 – 161HelicalPROSITE-ProRule annotationAdd BLAST21
Topological domaini162 – 189PeriplasmicSequence analysisAdd BLAST28
Transmembranei190 – 210HelicalPROSITE-ProRule annotationAdd BLAST21
Topological domaini211 – 214CytoplasmicSequence analysis4
Transmembranei215 – 235HelicalPROSITE-ProRule annotationAdd BLAST21
Topological domaini236 – 242PeriplasmicSequence analysis7
Transmembranei243 – 263HelicalPROSITE-ProRule annotationAdd BLAST21
Topological domaini264 – 280CytoplasmicSequence analysisAdd BLAST17

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000602411 – 280Inner membrane ABC transporter permease protein YcjPAdd BLAST280

Proteomic databases

PaxDbiP77716
PRIDEiP77716

Interactioni

Protein-protein interaction databases

BioGridi4263196, 13 interactors
STRINGi316385.ECDH10B_1429

Structurei

3D structure databases

ProteinModelPortaliP77716
SMRiP77716
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini74 – 265ABC transmembrane type-1PROSITE-ProRule annotationAdd BLAST192

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105DRW Bacteria
COG0395 LUCA
HOGENOMiHOG000220526
InParanoidiP77716
KOiK02026
OMAiNEFFFSF
PhylomeDBiP77716

Family and domain databases

CDDicd06261 TM_PBP2, 1 hit
Gene3Di1.10.3720.10, 1 hit
InterProiView protein in InterPro
IPR000515 MetI-like
IPR035906 MetI-like_sf
PfamiView protein in Pfam
PF00528 BPD_transp_1, 1 hit
SUPFAMiSSF161098 SSF161098, 1 hit
PROSITEiView protein in PROSITE
PS50928 ABC_TM1, 1 hit

Sequencei

Sequence statusi: Complete.

P77716-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MATNKRTLSR IGFYCGLALF LIITLFPFFV MLMTSFKGAK EAISLHPTLL
60 70 80 90 100
PQQWTLEHYV DIFNPMIFPF VDYFRNSLVV SVVSSVVAVF LGILGAYALS
110 120 130 140 150
RLRFKGRMTI NASFYTVYMF SGILLVVPLF KIITALGIYD TEMALIITMV
160 170 180 190 200
TQTLPTAVFM LKSYFDTIPD EIEEAAMMDG LNRLQIIFRI TVPLAMSGLI
210 220 230 240 250
SVFVYCFMVA WNDYLFASIF LSSASNFTLP VGLNALFSTP DYIWGRMMAA
260 270 280
SLVTALPVVI MYALSERFIK SGLTAGGVKG
Length:280
Mass (Da):31,250
Last modified:February 1, 1997 - v1
Checksum:iFD2E91F516CB9967
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC74394.1
AP009048 Genomic DNA Translation: BAA14888.1
PIRiC64880
RefSeqiNP_415828.1, NC_000913.3
WP_000224659.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74394; AAC74394; b1312
BAA14888; BAA14888; BAA14888
GeneIDi945892
KEGGiecj:JW1305
eco:b1312
PATRICifig|1411691.4.peg.967

Similar proteinsi

Entry informationi

Entry nameiYCJP_ECOLI
AccessioniPrimary (citable) accession number: P77716
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: March 28, 2018
This is version 125 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health