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Protein

Putative beta-xylosidase

Gene

yagH

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Catalytic activityi

Hydrolysis of (1->4)-beta-D-xylans, to remove successive D-xylose residues from the non-reducing termini.

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Glycosidase, Hydrolase

Keywords - Biological processi

Carbohydrate metabolism, Polysaccharide degradation, Xylan degradation

Enzyme and pathway databases

BioCyciEcoCyc:G6143-MONOMER.
ECOL316407:JW0264-MONOMER.

Protein family/group databases

CAZyiGH43. Glycoside Hydrolase Family 43.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative beta-xylosidase (EC:3.2.1.37)
Alternative name(s):
1,4-beta-D-xylan xylohydrolase
Xylan 1,4-beta-xylosidase
Gene namesi
Name:yagH
Ordered Locus Names:b0271, JW0264
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13347. yagH.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 536536Putative beta-xylosidasePRO_0000057697Add
BLAST

Proteomic databases

PaxDbiP77713.

Interactioni

Protein-protein interaction databases

BioGridi4261986. 9 interactions.
IntActiP77713. 5 interactions.
STRINGi511145.b0271.

Structurei

3D structure databases

ProteinModelPortaliP77713.
SMRiP77713. Positions 2-534.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the glycosyl hydrolase 43 family.Curated

Phylogenomic databases

eggNOGiENOG4105DSG. Bacteria.
COG3507. LUCA.
HOGENOMiHOG000112982.
InParanoidiP77713.
KOiK01198.
OMAiVCSSFEY.
PhylomeDBiP77713.

Family and domain databases

Gene3Di2.115.10.20. 1 hit.
2.60.120.200. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR009784. DUF1349.
IPR006710. Glyco_hydro_43.
IPR023296. Glyco_hydro_beta-prop.
[Graphical view]
PANTHERiPTHR22925. PTHR22925. 1 hit.
PfamiPF07081. DUF1349. 1 hit.
PF04616. Glyco_hydro_43. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.
SSF75005. SSF75005. 1 hit.

Sequencei

Sequence statusi: Complete.

P77713-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MEITNPILTG FNPDPSLCRQ GEDYYIATST FEWFPGVRIY HSRDLKNWSL
60 70 80 90 100
VSTPLDRVSM LDMKGNPDSG GIWAPCLSYA DGKFWLLYTD VKIVDSPWKN
110 120 130 140 150
GRNFLVTAPS IEGPWSEPIP MGNGGFDPSL FHDDDGRKYY IYRPWGPRHH
160 170 180 190 200
SNPHNTIVLQ AFDPQTGTLS PERKTLFTGT PLCYTEGAHL YRHAGWYYLM
210 220 230 240 250
AAEGGTSYEH AVVVLRSKNI DGPYELHPDV TMMTSWHLPE NPLQKSGHGS
260 270 280 290 300
LLQTHTGEWY MAYLTSRPLR LPGVPLLASG GRGYCPLGRE TGIARIEWRD
310 320 330 340 350
GWPYVEGGKH AQLTVKGPQV AEQPAAVPGN WRDDFDASSL DPELQTLRIP
360 370 380 390 400
FDDTLGSLTA RPGFLRLYGN DSLNSTFTQS TVARRWQHFA FRAETRMEFS
410 420 430 440 450
PVHFQQSAGL TCYYNSKNWS YCFVDYEEGQ GRTIKVIQLD HNVPSWPLHE
460 470 480 490 500
QPIPVPEHAE SVWLRVDVDT LVYRYSYSFD GETWHTVPVT YEAWKLSDDY
510 520 530
IGGRGFFTGA FVGLHCEDIS GDGCYADFDY FTYEPV
Length:536
Mass (Da):60,825
Last modified:February 1, 1997 - v1
Checksum:i60D3F038215CD216
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U70214 Genomic DNA. Translation: AAB08692.1.
U00096 Genomic DNA. Translation: AAC73374.1.
AP009048 Genomic DNA. Translation: BAE76055.1.
PIRiG64752.
RefSeqiNP_414805.1. NC_000913.3.
WP_000406871.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73374; AAC73374; b0271.
BAE76055; BAE76055; BAE76055.
GeneIDi944949.
KEGGiecj:JW0264.
eco:b0271.
PATRICi32115663. VBIEscCol129921_0275.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U70214 Genomic DNA. Translation: AAB08692.1.
U00096 Genomic DNA. Translation: AAC73374.1.
AP009048 Genomic DNA. Translation: BAE76055.1.
PIRiG64752.
RefSeqiNP_414805.1. NC_000913.3.
WP_000406871.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP77713.
SMRiP77713. Positions 2-534.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261986. 9 interactions.
IntActiP77713. 5 interactions.
STRINGi511145.b0271.

Protein family/group databases

CAZyiGH43. Glycoside Hydrolase Family 43.

Proteomic databases

PaxDbiP77713.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73374; AAC73374; b0271.
BAE76055; BAE76055; BAE76055.
GeneIDi944949.
KEGGiecj:JW0264.
eco:b0271.
PATRICi32115663. VBIEscCol129921_0275.

Organism-specific databases

EchoBASEiEB3131.
EcoGeneiEG13347. yagH.

Phylogenomic databases

eggNOGiENOG4105DSG. Bacteria.
COG3507. LUCA.
HOGENOMiHOG000112982.
InParanoidiP77713.
KOiK01198.
OMAiVCSSFEY.
PhylomeDBiP77713.

Enzyme and pathway databases

BioCyciEcoCyc:G6143-MONOMER.
ECOL316407:JW0264-MONOMER.

Miscellaneous databases

PROiP77713.

Family and domain databases

Gene3Di2.115.10.20. 1 hit.
2.60.120.200. 1 hit.
InterProiIPR013320. ConA-like_dom.
IPR009784. DUF1349.
IPR006710. Glyco_hydro_43.
IPR023296. Glyco_hydro_beta-prop.
[Graphical view]
PANTHERiPTHR22925. PTHR22925. 1 hit.
PfamiPF07081. DUF1349. 1 hit.
PF04616. Glyco_hydro_43. 1 hit.
[Graphical view]
SUPFAMiSSF49899. SSF49899. 1 hit.
SSF75005. SSF75005. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYAGH_ECOLI
AccessioniPrimary (citable) accession number: P77713
Secondary accession number(s): Q2MCF1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: September 7, 2016
This is version 104 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Multifunctional enzyme, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. Glycosyl hydrolases
    Classification of glycosyl hydrolase families and list of entries
  3. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.