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Protein

Putative protein TfaD

Gene

tfaD

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6315-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative protein TfaDCurated
Alternative name(s):
Putative tail fiber assembly protein homolog from lambdoid prophage DLP12
Gene namesi
Name:tfaD
Ordered Locus Names:b0561
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13640. tfaD.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000703041 – 187Putative protein TfaDAdd BLAST187

Proteomic databases

PaxDbiP77699.

Interactioni

Protein-protein interaction databases

STRINGi511145.b1546.

Structurei

3D structure databases

ProteinModelPortaliP77699.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

In the C-terminal section; belongs to the tfa family.Curated

Phylogenomic databases

eggNOGiENOG4105UZW. Bacteria.
ENOG4111ZCI. LUCA.
HOGENOMiHOG000118670.
PhylomeDBiP77699.

Family and domain databases

InterProiIPR008866. Phage_lambda_GpA.
IPR003458. Phage_T4_Gp38_tail_assem.
[Graphical view]
PfamiPF02413. Caudo_TAP. 1 hit.
PF05876. Terminase_GpA. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P77699-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNAMGSDYIR EVNVVKSARV GYSKMLLGVY AYFIEHKQRN TLIPAGFVAV
60 70 80 90 100
FNSDESSWHL VEDHRGKTVY DVASGDALFI SELGPLPENV TWLSPEGEFQ
110 120 130 140 150
KWNGTAWVKD AEAEKLFRIR EAEETKNSLM QVASEHIAPL QDAVDLEIAT
160 170 180
EEETSLLEAW KKYRVLLNRV DTSTAPDIEW PTNPVRE
Length:187
Mass (Da):21,203
Last modified:November 2, 2016 - v2
Checksum:i630CF347AFF76284
GO

Sequence cautioni

The sequence AAB40757 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U82598 Genomic DNA. Translation: AAB40757.1. Different initiation.
U00096 Genomic DNA. No translation available.
PIRiG64788.
RefSeqiWP_001027248.1. NZ_LN832404.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U82598 Genomic DNA. Translation: AAB40757.1. Different initiation.
U00096 Genomic DNA. No translation available.
PIRiG64788.
RefSeqiWP_001027248.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP77699.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

STRINGi511145.b1546.

Proteomic databases

PaxDbiP77699.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

EchoBASEiEB3404.
EcoGeneiEG13640. tfaD.

Phylogenomic databases

eggNOGiENOG4105UZW. Bacteria.
ENOG4111ZCI. LUCA.
HOGENOMiHOG000118670.
PhylomeDBiP77699.

Enzyme and pathway databases

BioCyciEcoCyc:G6315-MONOMER.

Family and domain databases

InterProiIPR008866. Phage_lambda_GpA.
IPR003458. Phage_T4_Gp38_tail_assem.
[Graphical view]
PfamiPF02413. Caudo_TAP. 1 hit.
PF05876. Terminase_GpA. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiTFAD_ECOLI
AccessioniPrimary (citable) accession number: P77699
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 2, 2016
Last modified: November 2, 2016
This is version 74 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Miscellaneous

Encoded by the cryptic lambdoid prophage DLP12.

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.