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Protein

Uncharacterized protein YbcV

Gene

ybcV

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Miscellaneous

Encoded by the cryptic lambdoid prophage DLP12.

Enzyme and pathway databases

BioCyciEcoCyc:G6313-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YbcV
Gene namesi
Name:ybcV
Ordered Locus Names:b0558, JW5081
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13638 ybcV

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001686561 – 136Uncharacterized protein YbcVAdd BLAST136

Proteomic databases

PaxDbiP77598
PRIDEiP77598

Interactioni

Protein-protein interaction databases

BioGridi4262823, 17 interactors
DIPiDIP-11339N

Structurei

3D structure databases

ProteinModelPortaliP77598
SMRiP77598
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To E.coli YcgX and YdfO.Curated

Phylogenomic databases

eggNOGiCOG5562 LUCA
HOGENOMiHOG000119635
OMAiLIETSYN
PhylomeDBiP77598

Family and domain databases

Gene3Di3.30.1810.10, 1 hit
InterProiView protein in InterPro
IPR009833 DUF1398
IPR036696 YdfO-like_sf
PfamiView protein in Pfam
PF07166 DUF1398, 1 hit
ProDomiView protein in ProDom or Entries sharing at least one domain
PD021249 DUF1398, 1 hit
SUPFAMiSSF160419 SSF160419, 1 hit

Sequencei

Sequence statusi: Complete.

P77598-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAQVAIFKEI FDQVRKDLNC ELFYSELKRH NVSHYIYYLA TDNIHIVLEN
60 70 80 90 100
DNTVLIKGLK KVVNVKFSRN THLIETSYDR LKSREITFQQ YRENLAKAGV
110 120 130
FRWITNIHEH KRYYYTFDNS LLFTESIQNT TQIFPR
Length:136
Mass (Da):16,414
Last modified:November 13, 2007 - v2
Checksum:iEFA91E401632B1F3
GO

Sequence cautioni

The sequence AAB40754 differs from that shown. Reason: Erroneous initiation.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U82598 Genomic DNA Translation: AAB40754.1 Different initiation.
U00096 Genomic DNA Translation: AAC73659.2
AP009048 Genomic DNA Translation: BAE76334.1
PIRiD64788
RefSeqiNP_415090.2, NC_000913.3
WP_000079503.1, NZ_CP014272.1

Genome annotation databases

EnsemblBacteriaiAAC73659; AAC73659; b0558
BAE76334; BAE76334; BAE76334
GeneIDi945178
KEGGiecj:JW5081
eco:b0558
PATRICifig|511145.12.peg.581

Similar proteinsi

Entry informationi

Entry nameiYBCV_ECOLI
AccessioniPrimary (citable) accession number: P77598
Secondary accession number(s): Q2MBM2
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: November 13, 2007
Last modified: March 28, 2018
This is version 104 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health