Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Uncharacterized protein YagF

Gene

yagF

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

  • xylonate dehydratase activity Source: EcoCyc

GO - Biological processi

  • aldonic acid catabolic process Source: EcoCyc
  • branched-chain amino acid biosynthetic process Source: GO_Central
Complete GO annotation...

Keywords - Molecular functioni

Lyase

Enzyme and pathway databases

BioCyciEcoCyc:G6141-MONOMER.
ECOL316407:JW0262-MONOMER.
MetaCyc:G6141-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YagF (EC:4.-.-.-)
Gene namesi
Name:yagF
Ordered Locus Names:b0269, JW0262
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13345. yagF.

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 655655Uncharacterized protein YagFPRO_0000103560Add
BLAST

Proteomic databases

PaxDbiP77596.

Interactioni

Protein-protein interaction databases

BioGridi4261825. 9 interactions.
STRINGi511145.b0269.

Structurei

3D structure databases

ProteinModelPortaliP77596.
SMRiP77596. Positions 118-575.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the IlvD/Edd family.Curated

Phylogenomic databases

eggNOGiENOG4105C01. Bacteria.
COG0129. LUCA.
HOGENOMiHOG000173155.
OMAiFDFLETS.
PhylomeDBiP77596.

Family and domain databases

InterProiIPR015928. Aconitase/3IPM_dehydase_swvl.
IPR017798. Dehydratase_YjhG/YagF.
IPR000581. DiOHA_6PGluconate_deHydtase.
IPR020558. DiOHA_6PGluconate_deHydtase_CS.
[Graphical view]
PANTHERiPTHR21000. PTHR21000. 1 hit.
PfamiPF00920. ILVD_EDD. 1 hit.
[Graphical view]
SUPFAMiSSF52016. SSF52016. 1 hit.
TIGRFAMsiTIGR03432. yjhG_yagF. 1 hit.
PROSITEiPS00886. ILVD_EDD_1. 1 hit.
PS00887. ILVD_EDD_2. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P77596-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MTIEKIFTPQ DDAFYAVITH AAGPQGALPL TPQMLMESPS GNLFGMTQNA
60 70 80 90 100
GMGWDANKLT GKEVLIIGTQ GGIRAGDGRP IALGYHTGHW EIGMQMQAAA
110 120 130 140 150
KEITRNGGIP FAAFVSDPCD GRSQGTHGMF DSLPYRNDAA IVFRRLIRSL
160 170 180 190 200
PTRRAVIGVA TCDKGLPATM IALAAMHDLP TILVPGGATL PPTVGEDAGK
210 220 230 240 250
VQTIGARFAN HELSLQEAAE LGCRACASPG GGCQFLGTAG TSQVVAEALG
260 270 280 290 300
LALPHSALAP SGQAVWLEIA RQSARAVSEL DSRGITTRDI LSDKAIENAM
310 320 330 340 350
VIHAAFGGST NLLLHIPAIA HAAGCTIPDV EHWTRINRKV PRLVSVLPNG
360 370 380 390 400
PDYHPTVRAF LAGGVPEVML HLRDLGLLHL DAMTVTGQTV GENLEWWQAS
410 420 430 440 450
ERRARFRQCL REQDGVEPDD VILPPEKAKA KGLTSTVCFP TGNIAPEGSV
460 470 480 490 500
IKATAIDPSV VGEDGVYHHT GRVRVFVSEA QAIKAIKREE IVQGDIMVVI
510 520 530 540 550
GGGPSGTGME ETYQLTSALK HISWGKTVSL ITDARFSGVS TGACFGHVSP
560 570 580 590 600
EALAGGPIGK LRDNDIIEIA VDRLTLTGSV NFIGTADNPL TPEEGARELA
610 620 630 640 650
RRQTHPDLHA HDFLPDDTRL WAALQSVSGG TWKGCIYDTD KIIEVINAGK

KALGI
Length:655
Mass (Da):69,399
Last modified:February 1, 1997 - v1
Checksum:i208AF2F6DB39EE8B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U70214 Genomic DNA. Translation: AAB08690.1.
U00096 Genomic DNA. Translation: AAC73372.1.
AP009048 Genomic DNA. Translation: BAE76053.1.
PIRiE64752.
RefSeqiNP_414803.1. NC_000913.3.
WP_000151261.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73372; AAC73372; b0269.
BAE76053; BAE76053; BAE76053.
GeneIDi944928.
KEGGiecj:JW0262.
eco:b0269.
PATRICi32115659. VBIEscCol129921_0273.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U70214 Genomic DNA. Translation: AAB08690.1.
U00096 Genomic DNA. Translation: AAC73372.1.
AP009048 Genomic DNA. Translation: BAE76053.1.
PIRiE64752.
RefSeqiNP_414803.1. NC_000913.3.
WP_000151261.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP77596.
SMRiP77596. Positions 118-575.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261825. 9 interactions.
STRINGi511145.b0269.

Proteomic databases

PaxDbiP77596.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73372; AAC73372; b0269.
BAE76053; BAE76053; BAE76053.
GeneIDi944928.
KEGGiecj:JW0262.
eco:b0269.
PATRICi32115659. VBIEscCol129921_0273.

Organism-specific databases

EchoBASEiEB3129.
EcoGeneiEG13345. yagF.

Phylogenomic databases

eggNOGiENOG4105C01. Bacteria.
COG0129. LUCA.
HOGENOMiHOG000173155.
OMAiFDFLETS.
PhylomeDBiP77596.

Enzyme and pathway databases

BioCyciEcoCyc:G6141-MONOMER.
ECOL316407:JW0262-MONOMER.
MetaCyc:G6141-MONOMER.

Miscellaneous databases

PROiP77596.

Family and domain databases

InterProiIPR015928. Aconitase/3IPM_dehydase_swvl.
IPR017798. Dehydratase_YjhG/YagF.
IPR000581. DiOHA_6PGluconate_deHydtase.
IPR020558. DiOHA_6PGluconate_deHydtase_CS.
[Graphical view]
PANTHERiPTHR21000. PTHR21000. 1 hit.
PfamiPF00920. ILVD_EDD. 1 hit.
[Graphical view]
SUPFAMiSSF52016. SSF52016. 1 hit.
TIGRFAMsiTIGR03432. yjhG_yagF. 1 hit.
PROSITEiPS00886. ILVD_EDD_1. 1 hit.
PS00887. ILVD_EDD_2. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYAGF_ECOLI
AccessioniPrimary (citable) accession number: P77596
Secondary accession number(s): Q2MCF3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: September 7, 2016
This is version 107 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.