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Protein

Uncharacterized fimbrial-like protein YdeQ

Gene

ydeQ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G6792-MONOMER.
ECOL316407:JW1496-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized fimbrial-like protein YdeQ
Gene namesi
Name:ydeQ
Ordered Locus Names:b1502, JW1496
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13799. ydeQ.

Subcellular locationi

GO - Cellular componenti

  • pilus Source: UniProtKB-SubCell
Complete GO annotation...

Keywords - Cellular componenti

Fimbrium

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Signal peptidei1 – 2626Sequence analysisAdd
BLAST
Chaini27 – 304278Uncharacterized fimbrial-like protein YdeQPRO_0000009257Add
BLAST

Proteomic databases

PaxDbiP77588.

Interactioni

Protein-protein interaction databases

BioGridi4261139. 17 interactions.
STRINGi511145.b1502.

Structurei

3D structure databases

ProteinModelPortaliP77588.
SMRiP77588. Positions 25-304.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the fimbrial protein family.Curated

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4106PIH. Bacteria.
ENOG410YESZ. LUCA.
HOGENOMiHOG000120719.
OMAiMSQHISC.
OrthoDBiEOG6CVV8Q.

Family and domain databases

Gene3Di2.60.40.1090. 2 hits.
InterProiIPR008966. Adhesion_dom.
IPR000259. Adhesion_dom_fimbrial.
IPR015243. FimH_man-bd.
[Graphical view]
PfamiPF09160. FimH_man-bind. 1 hit.
[Graphical view]
SUPFAMiSSF49401. SSF49401. 2 hits.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P77588-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKTISIKVL FGIYLLLMAG KVFAFSCNVD GGSSIGAGTT SVYVNLDPVI
60 70 80 90 100
QPGQNLVVDL SQHISCWNDY GGWYDTDHIN LVQGSAFAGS LQSYKGSLYW
110 120 130 140 150
NNVTYPFPLT TNTNVLDIGD KTPMPLPLKL YITPVGAAGG VVIKAGEVIA
160 170 180 190 200
RIHMYKIATL GSGNPRNFTW NIISNNNVVM PTGGCTVDSR NVTVDLPDFP
210 220 230 240 250
GSAEIPLGVY CSSEQKLSFY LSGATTDSSR QVFANTAPDA TKASGVGVTL
260 270 280 290 300
MRNGKILATG ENVSLGTVNK SKVPLGLSAT YGQTGNKVSA GTVQSVIGVT

FIYE
Length:304
Mass (Da):32,070
Last modified:February 1, 1997 - v1
Checksum:i8153C86E3087D99A
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74575.1.
AP009048 Genomic DNA. Translation: BAA15175.1.
PIRiA64904.
RefSeqiNP_416019.1. NC_000913.3.
WP_000520676.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74575; AAC74575; b1502.
BAA15175; BAA15175; BAA15175.
GeneIDi946050.
KEGGiecj:JW1496.
eco:b1502.
PATRICi32118298. VBIEscCol129921_1569.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74575.1.
AP009048 Genomic DNA. Translation: BAA15175.1.
PIRiA64904.
RefSeqiNP_416019.1. NC_000913.3.
WP_000520676.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP77588.
SMRiP77588. Positions 25-304.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261139. 17 interactions.
STRINGi511145.b1502.

Proteomic databases

PaxDbiP77588.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74575; AAC74575; b1502.
BAA15175; BAA15175; BAA15175.
GeneIDi946050.
KEGGiecj:JW1496.
eco:b1502.
PATRICi32118298. VBIEscCol129921_1569.

Organism-specific databases

EchoBASEiEB3560.
EcoGeneiEG13799. ydeQ.

Phylogenomic databases

eggNOGiENOG4106PIH. Bacteria.
ENOG410YESZ. LUCA.
HOGENOMiHOG000120719.
OMAiMSQHISC.
OrthoDBiEOG6CVV8Q.

Enzyme and pathway databases

BioCyciEcoCyc:G6792-MONOMER.
ECOL316407:JW1496-MONOMER.

Miscellaneous databases

PROiP77588.

Family and domain databases

Gene3Di2.60.40.1090. 2 hits.
InterProiIPR008966. Adhesion_dom.
IPR000259. Adhesion_dom_fimbrial.
IPR015243. FimH_man-bd.
[Graphical view]
PfamiPF09160. FimH_man-bind. 1 hit.
[Graphical view]
SUPFAMiSSF49401. SSF49401. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYDEQ_ECOLI
AccessioniPrimary (citable) accession number: P77588
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: February 1, 1997
Last modified: January 20, 2016
This is version 103 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.