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Protein

Uncharacterized protein YdhW

Gene

ydhW

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at transcript leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6900-MONOMER.
ECOL316407:JW1662-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YdhW
Gene namesi
Name:ydhW
Ordered Locus Names:b1672, JW1662
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13957. ydhW.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 215215Uncharacterized protein YdhWPRO_0000168981Add
BLAST

Proteomic databases

PaxDbiP77564.

Expressioni

Inductioni

Up-regulated by the oxygen-responsive transcription factor FNR under anaerobic conditions. Repressed in the presence of nitrate or nitrite via the two-component systems NarXL and NarPQ, respectively.1 Publication

Interactioni

Protein-protein interaction databases

BioGridi4261765. 20 interactions.
IntActiP77564. 11 interactions.
STRINGi511145.b1672.

Structurei

3D structure databases

ProteinModelPortaliP77564.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105JVW. Bacteria.
ENOG4111TJ2. LUCA.
HOGENOMiHOG000120953.
OMAiGLCEWLE.

Sequencei

Sequence statusi: Complete.

P77564-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGKMNHQDEL PLAKVSEVDE AKRQWLQGMR HPVDTVTEPE PAEILAEFIR
60 70 80 90 100
QHSAAGQLVA RAVFLSPPYL VAEEELSVLL ESIKQNGDYA DIACLTGSKD
110 120 130 140 150
DYYYSTQAMS ENYAAMSLQV VEQDICRAIA HAVRFECQTY PRPYKVAMLM
160 170 180 190 200
QAPYYFQEAQ IEAAIAAMDV APEYADIRQV ESSTAVLYLF SERFMTYGKA
210
YGLCEWFEVE QFQNP
Length:215
Mass (Da):24,421
Last modified:February 1, 1997 - v1
Checksum:i58A9C22E01D548AB
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U68703 Genomic DNA. Translation: AAB47948.1.
U00096 Genomic DNA. Translation: AAC74742.1.
AP009048 Genomic DNA. Translation: BAE76497.1.
PIRiH64924.
RefSeqiNP_416187.1. NC_000913.3.

Genome annotation databases

EnsemblBacteriaiAAC74742; AAC74742; b1672.
BAE76497; BAE76497; BAE76497.
GeneIDi947180.
KEGGiecj:JW1662.
eco:b1672.
PATRICi32118650. VBIEscCol129921_1743.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U68703 Genomic DNA. Translation: AAB47948.1.
U00096 Genomic DNA. Translation: AAC74742.1.
AP009048 Genomic DNA. Translation: BAE76497.1.
PIRiH64924.
RefSeqiNP_416187.1. NC_000913.3.

3D structure databases

ProteinModelPortaliP77564.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261765. 20 interactions.
IntActiP77564. 11 interactions.
STRINGi511145.b1672.

Proteomic databases

PaxDbiP77564.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74742; AAC74742; b1672.
BAE76497; BAE76497; BAE76497.
GeneIDi947180.
KEGGiecj:JW1662.
eco:b1672.
PATRICi32118650. VBIEscCol129921_1743.

Organism-specific databases

EchoBASEiEB3715.
EcoGeneiEG13957. ydhW.

Phylogenomic databases

eggNOGiENOG4105JVW. Bacteria.
ENOG4111TJ2. LUCA.
HOGENOMiHOG000120953.
OMAiGLCEWLE.

Enzyme and pathway databases

BioCyciEcoCyc:G6900-MONOMER.
ECOL316407:JW1662-MONOMER.

Miscellaneous databases

PROiP77564.

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiYDHW_ECOLI
AccessioniPrimary (citable) accession number: P77564
Secondary accession number(s): Q2MB59
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: February 1, 1997
Last modified: September 7, 2016
This is version 88 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.