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Protein

Protein YdeP

Gene

ydeP

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at transcript leveli

Functioni

Probably involved in acid resistance.2 Publications

Cofactori

Protein has several cofactor binding sites:

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi49Iron-sulfur (4Fe-4S)By similarity1
Metal bindingi52Iron-sulfur (4Fe-4S)By similarity1

GO - Molecular functioni

GO - Biological processi

  • response to acidic pH Source: EcoCyc

Keywordsi

Molecular functionOxidoreductase
Ligand4Fe-4S, Iron, Iron-sulfur, Metal-binding, Molybdenum

Enzyme and pathway databases

BioCyciEcoCyc:G6791-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Protein YdeP
Gene namesi
Name:ydeP
Ordered Locus Names:b1501, JW1495
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13798 ydeP

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000632271 – 759Protein YdePAdd BLAST759

Proteomic databases

PaxDbiP77561
PRIDEiP77561

Expressioni

Inductioni

By EvgA.2 Publications

Interactioni

Protein-protein interaction databases

BioGridi4260213, 9 interactors
DIPiDIP-28057N
IntActiP77561, 11 interactors
STRINGi316385.ECDH10B_1631

Structurei

3D structure databases

ProteinModelPortaliP77561
SMRiP77561
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4107QKC Bacteria
COG0243 LUCA
HOGENOMiHOG000200066
InParanoidiP77561
OMAiDDFDHCD
PhylomeDBiP77561

Family and domain databases

CDDicd02787 MopB_CT_ydeP, 1 hit
InterProiView protein in InterPro
IPR009010 Asp_de-COase-like_dom_sf
IPR037951 MopB_CT_YdeP
IPR006657 MoPterin_dinucl-bd_dom
IPR006656 Mopterin_OxRdtase
IPR010046 Mopterin_OxRdtse_a_bac
PANTHERiPTHR43105:SF4 PTHR43105:SF4, 1 hit
PfamiView protein in Pfam
PF00384 Molybdopterin, 1 hit
PF01568 Molydop_binding, 1 hit
SUPFAMiSSF50692 SSF50692, 1 hit
TIGRFAMsiTIGR01701 Fdhalpha-like, 1 hit

Sequencei

Sequence statusi: Complete.

P77561-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKKIESYQG AAGGWGAVKS VANAVRKQMD IRQDVIAMFD MNKPEGFDCP
60 70 80 90 100
GCAWPDPKHS ASFDICENGA KAIAWEVTDK QVNASFFAEN TVQSLLTWGD
110 120 130 140 150
HELEAAGRLT QPLKYDAVSD CYKPLSWQQA FDEIGARLQS YSDPNQVEFY
160 170 180 190 200
TSGRTSNEAA FLYQLFAREY GSNNFPDCSN MCHEPTSVGL AASIGVGKGT
210 220 230 240 250
VLLEDFEKCD LVICIGHNPG TNHPRMLTSL RALVKRGAKM IAINPLQERG
260 270 280 290 300
LERFTAPQNP FEMLTNSETQ LASAYYNVRI GGDMALLKGM MRLLIERDDA
310 320 330 340 350
ASAAGRPSLL DDEFIQTHTV GFDELRRDVL NSEWKDIERI SGLSQTQIAE
360 370 380 390 400
LADAYAAAER TIICYGMGIT QHEHGTQNVQ QLVNLLLMKG NIGKPGAGIC
410 420 430 440 450
PLRGHSNVQG DRTVGITEKP SAEFLARLGE RYGFTPPHAP GHAAIASMQA
460 470 480 490 500
ICTGQARALI CMGGNFALAM PDREASAVPL TQLDLAVHVA TKLNRSHLLT
510 520 530 540 550
ARHSYILPVL GRSEIDMQKN GAQAVTVEDS MSMIHASRGV LKPAGVMLKS
560 570 580 590 600
ECAVVAGIAQ AALPQSVVAW EYLVEDYDRI RNDIEAVLPE FADYNQRIRH
610 620 630 640 650
PGGFHLINAA AERRWMTPSG KANFITSKGL LEDPSSAFNS KLVMATVRSH
660 670 680 690 700
DQYNTTIYGM DDRYRGVFGQ RDVVFMSAKQ AKICRVKNGE RVNLIALTPD
710 720 730 740 750
GKRSSRRMDR LKVVIYPMAD RSLVTYFPES NHMLTLDNHD PLSGIPGYKS

IPVELEPSN
Length:759
Mass (Da):83,495
Last modified:February 1, 1997 - v1
Checksum:i4DE7C14068FB66DD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC74574.1
AP009048 Genomic DNA Translation: BAA15174.1
PIRiH64903
RefSeqiNP_416018.1, NC_000913.3
WP_000726691.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74574; AAC74574; b1501
BAA15174; BAA15174; BAA15174
GeneIDi946055
KEGGiecj:JW1495
eco:b1501
PATRICifig|1411691.4.peg.765

Similar proteinsi

Entry informationi

Entry nameiYDEP_ECOLI
AccessioniPrimary (citable) accession number: P77561
Secondary accession number(s): P78160
Entry historyiIntegrated into UniProtKB/Swiss-Prot: March 27, 2002
Last sequence update: February 1, 1997
Last modified: March 28, 2018
This is version 134 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health