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Protein

Uncharacterized zinc-type alcohol dehydrogenase-like protein YdjL

Gene

ydjL

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Cofactori

Zn2+By similarityNote: Binds 2 Zn2+ ions per subunit.By similarity

Sites

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Metal bindingi39 – 391Zinc 1; catalytic
Metal bindingi61 – 611Zinc 1; catalyticBy similarity
Metal bindingi92 – 921Zinc 2By similarity
Metal bindingi95 – 951Zinc 2By similarity
Metal bindingi98 – 981Zinc 2By similarity
Metal bindingi106 – 1061Zinc 2By similarity
Metal bindingi157 – 1571Zinc 1; catalyticBy similarity

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Ligandi

Metal-binding, Zinc

Enzyme and pathway databases

BioCyciEcoCyc:G6963-MONOMER.
ECOL316407:JW1765-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized zinc-type alcohol dehydrogenase-like protein YdjL (EC:1.-.-.-)
Gene namesi
Name:ydjL
Ordered Locus Names:b1776, JW1765
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13488. ydjL.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 358358Uncharacterized zinc-type alcohol dehydrogenase-like protein YdjLPRO_0000160893Add
BLAST

Proteomic databases

PaxDbiP77539.

Interactioni

Protein-protein interaction databases

BioGridi4262036. 5 interactions.
DIPiDIP-11774N.
STRINGi511145.b1776.

Structurei

3D structure databases

ProteinModelPortaliP77539.
SMRiP77539. Positions 1-354.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4105CPQ. Bacteria.
COG1063. LUCA.
HOGENOMiHOG000294686.
InParanoidiP77539.
OMAiFETCEEC.
OrthoDBiEOG6ZWJCC.
PhylomeDBiP77539.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
3.90.180.10. 1 hit.
InterProiIPR013149. ADH_C.
IPR013154. ADH_N.
IPR002085. ADH_SF_Zn-type.
IPR002328. ADH_Zn_CS.
IPR011032. GroES-like.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERiPTHR11695. PTHR11695. 1 hit.
PfamiPF08240. ADH_N. 1 hit.
PF00107. ADH_zinc_N. 1 hit.
[Graphical view]
SUPFAMiSSF50129. SSF50129. 1 hit.
SSF51735. SSF51735. 1 hit.
PROSITEiPS00059. ADH_ZINC. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P77539-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKALARFGKA FGGYKMIDVP QPMCGPEDVV IEIKAAAICG ADMKHYNVDS
60 70 80 90 100
GSDEFNSIRG HEFAGCIAQV GEKVKDWKVG QRVVSDNSGH VCGVCPACEQ
110 120 130 140 150
GDFLCCTEKV NLGLDNNTWG GGFSKYCLVP GEILKIHRHA LWEIPDGVDY
160 170 180 190 200
EDAAVLDPIC NAYKSIAQQS KFLPGQDVVV IGTGPLGLFS VQMARIMGAV
210 220 230 240 250
NIVVVGLQED VAVRFPVAKE LGATAVVNGS TEDVVARCQQ ICGKDNLGLV
260 270 280 290 300
IECSGANIAL KQAIEMLRPN GEVVRVGMGF KPLDFSINDI TAWNKSIIGH
310 320 330 340 350
MAYDSTSWRN AIRLLASGAI KVKPMITHRI GLSQWREGFD AMVDKTAIKV

IMTYDFDE
Length:358
Mass (Da):38,732
Last modified:February 1, 1997 - v1
Checksum:iB45C8C35B20ED24D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74846.1.
AP009048 Genomic DNA. Translation: BAA15574.1.
PIRiH64937.
RefSeqiNP_416290.1. NC_000913.3.
WP_000645221.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74846; AAC74846; b1776.
BAA15574; BAA15574; BAA15574.
GeneIDi946299.
KEGGiecj:JW1765.
eco:b1776.
PATRICi32118863. VBIEscCol129921_1849.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74846.1.
AP009048 Genomic DNA. Translation: BAA15574.1.
PIRiH64937.
RefSeqiNP_416290.1. NC_000913.3.
WP_000645221.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP77539.
SMRiP77539. Positions 1-354.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262036. 5 interactions.
DIPiDIP-11774N.
STRINGi511145.b1776.

Proteomic databases

PaxDbiP77539.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74846; AAC74846; b1776.
BAA15574; BAA15574; BAA15574.
GeneIDi946299.
KEGGiecj:JW1765.
eco:b1776.
PATRICi32118863. VBIEscCol129921_1849.

Organism-specific databases

EchoBASEiEB3261.
EcoGeneiEG13488. ydjL.

Phylogenomic databases

eggNOGiENOG4105CPQ. Bacteria.
COG1063. LUCA.
HOGENOMiHOG000294686.
InParanoidiP77539.
OMAiFETCEEC.
OrthoDBiEOG6ZWJCC.
PhylomeDBiP77539.

Enzyme and pathway databases

BioCyciEcoCyc:G6963-MONOMER.
ECOL316407:JW1765-MONOMER.

Miscellaneous databases

PROiP77539.

Family and domain databases

Gene3Di3.40.50.720. 1 hit.
3.90.180.10. 1 hit.
InterProiIPR013149. ADH_C.
IPR013154. ADH_N.
IPR002085. ADH_SF_Zn-type.
IPR002328. ADH_Zn_CS.
IPR011032. GroES-like.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PANTHERiPTHR11695. PTHR11695. 1 hit.
PfamiPF08240. ADH_N. 1 hit.
PF00107. ADH_zinc_N. 1 hit.
[Graphical view]
SUPFAMiSSF50129. SSF50129. 1 hit.
SSF51735. SSF51735. 1 hit.
PROSITEiPS00059. ADH_ZINC. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYDJL_ECOLI
AccessioniPrimary (citable) accession number: P77539
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: February 1, 1997
Last modified: January 20, 2016
This is version 113 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.