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Protein

Side tail fiber protein homolog from lambdoid prophage Qin

Gene

stfQ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G6821-MONOMER.
ECOL316407:JW1540-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Side tail fiber protein homolog from lambdoid prophage Qin
Gene namesi
Name:stfQ
Synonyms:ydfN
Ordered Locus Names:b1547, JW1540
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13826. stfQ.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 320320Side tail fiber protein homolog from lambdoid prophage QinPRO_0000077742Add
BLAST

Proteomic databases

PaxDbiP77515.

Interactioni

Protein-protein interaction databases

BioGridi4260773. 15 interactions.
DIPiDIP-10931N.
IntActiP77515. 12 interactions.
STRINGi511145.b1547.

Structurei

3D structure databases

ProteinModelPortaliP77515.
SMRiP77515. Positions 91-320.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the tail fiber family.Curated

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiENOG410685N. Bacteria.
ENOG410XVET. LUCA.
HOGENOMiHOG000118659.
OMAiDMGWTIK.
OrthoDBiEOG6TBHBN.

Family and domain databases

Gene3Di3.90.1340.10. 1 hit.
InterProiIPR005003. Phage_lambda_Stf-r1.
IPR011083. Phage_tail_collar_dom.
[Graphical view]
PfamiPF07484. Collar. 1 hit.
PF03335. Phage_fiber. 5 hits.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P77515-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNITALTDNT QGAAGLELYE VYNNGYPTAY GNIIHLKGMT AVGEGELLIG
60 70 80 90 100
WSGTSGAHAP AFIRSRRDTT DANWSPWAQL YTSAHPPAEF YPVGAPIPWP
110 120 130 140 150
SDTVPSGYAL MQGQTFDKSA YPKLAVAYPS GVIPDMRGWT IKGKPASGRA
160 170 180 190 200
VLSQEQDGIK SHTHSASASS TDLGTETTSS FDYGTKSTNN TGAHTHSISG
210 220 230 240 250
TANSAGAHQH KSSGAFGGTN TSIFPNGYTA ISNLSAGIMS TTSGSGQTRN
260 270 280 290 300
AGKTSSDGAH THSLSGTAAS AGAHAHTVGI GAHTHSVAIG SHGHTITVNA
310 320
AGNAENTVKN IAFNYIVRLA
Length:320
Mass (Da):32,902
Last modified:February 1, 1997 - v1
Checksum:i55BB570EC9591D84
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74620.1.
AP009048 Genomic DNA. Translation: BAA15251.1.
PIRiF64909.
RefSeqiNP_416065.1. NC_000913.3.
WP_001027733.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74620; AAC74620; b1547.
BAA15251; BAA15251; BAA15251.
GeneIDi946098.
KEGGiecj:JW1540.
eco:b1547.
PATRICi32118394. VBIEscCol129921_1617.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74620.1.
AP009048 Genomic DNA. Translation: BAA15251.1.
PIRiF64909.
RefSeqiNP_416065.1. NC_000913.3.
WP_001027733.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP77515.
SMRiP77515. Positions 91-320.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260773. 15 interactions.
DIPiDIP-10931N.
IntActiP77515. 12 interactions.
STRINGi511145.b1547.

Proteomic databases

PaxDbiP77515.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74620; AAC74620; b1547.
BAA15251; BAA15251; BAA15251.
GeneIDi946098.
KEGGiecj:JW1540.
eco:b1547.
PATRICi32118394. VBIEscCol129921_1617.

Organism-specific databases

EchoBASEiEB3587.
EcoGeneiEG13826. stfQ.

Phylogenomic databases

eggNOGiENOG410685N. Bacteria.
ENOG410XVET. LUCA.
HOGENOMiHOG000118659.
OMAiDMGWTIK.
OrthoDBiEOG6TBHBN.

Enzyme and pathway databases

BioCyciEcoCyc:G6821-MONOMER.
ECOL316407:JW1540-MONOMER.

Miscellaneous databases

PROiP77515.

Family and domain databases

Gene3Di3.90.1340.10. 1 hit.
InterProiIPR005003. Phage_lambda_Stf-r1.
IPR011083. Phage_tail_collar_dom.
[Graphical view]
PfamiPF07484. Collar. 1 hit.
PF03335. Phage_fiber. 5 hits.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiSTFQ_ECOLI
AccessioniPrimary (citable) accession number: P77515
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: February 1, 1997
Last modified: January 20, 2016
This is version 106 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.