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Protein

Uncharacterized sugar kinase YdjH

Gene

ydjH

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Molecular functioni

Keywordsi

Molecular functionKinase, Transferase

Enzyme and pathway databases

BioCyciEcoCyc:G6959-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized sugar kinase YdjH (EC:2.7.1.-)
Gene namesi
Name:ydjH
Ordered Locus Names:b1772, JW5289
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13484 ydjH

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000801451 – 315Uncharacterized sugar kinase YdjHAdd BLAST315

Proteomic databases

PaxDbiP77493
PRIDEiP77493

Interactioni

Protein-protein interaction databases

BioGridi4259545, 102 interactors
IntActiP77493, 2 interactors
STRINGi316385.ECDH10B_1910

Structurei

Secondary structure

1315
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi4 – 10Combined sources7
Beta strandi13 – 18Combined sources6
Helixi23 – 27Combined sources5
Beta strandi39 – 42Combined sources4
Helixi43 – 53Combined sources11
Beta strandi57 – 61Combined sources5
Beta strandi63 – 67Combined sources5
Helixi68 – 80Combined sources13
Beta strandi88 – 90Combined sources3
Beta strandi97 – 102Combined sources6
Beta strandi108 – 111Combined sources4
Helixi117 – 120Combined sources4
Helixi123 – 125Combined sources3
Helixi128 – 133Combined sources6
Beta strandi135 – 142Combined sources8
Helixi150 – 162Combined sources13
Beta strandi166 – 171Combined sources6
Beta strandi175 – 177Combined sources3
Helixi180 – 187Combined sources8
Beta strandi191 – 194Combined sources4
Helixi197 – 204Combined sources8
Helixi209 – 217Combined sources9
Turni218 – 220Combined sources3
Beta strandi222 – 227Combined sources6
Helixi229 – 231Combined sources3
Beta strandi233 – 237Combined sources5
Beta strandi240 – 244Combined sources5
Helixi258 – 271Combined sources14
Helixi276 – 291Combined sources16
Beta strandi293 – 299Combined sources7
Beta strandi301 – 303Combined sources3
Helixi304 – 307Combined sources4

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
3H49X-ray1.80A/B2-315[»]
3IN1X-ray2.15A/B2-315[»]
ProteinModelPortaliP77493
SMRiP77493
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP77493

Family & Domainsi

Sequence similaritiesi

Belongs to the carbohydrate kinase PfkB family.Curated

Phylogenomic databases

eggNOGiENOG4107UH8 Bacteria
COG0524 LUCA
HOGENOMiHOG000121120
InParanoidiP77493
OMAiFIDLGTG
PhylomeDBiP77493

Family and domain databases

Gene3Di3.40.1190.20, 1 hit
InterProiView protein in InterPro
IPR002173 Carboh/pur_kinase_PfkB_CS
IPR011611 PfkB_dom
IPR002139 Ribo/fructo_kinase
IPR029056 Ribokinase-like
PfamiView protein in Pfam
PF00294 PfkB, 1 hit
PRINTSiPR00990 RIBOKINASE
SUPFAMiSSF53613 SSF53613, 1 hit
PROSITEiView protein in PROSITE
PS00583 PFKB_KINASES_1, 1 hit
PS00584 PFKB_KINASES_2, 1 hit

Sequencei

Sequence statusi: Complete.

P77493-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDNLDVICIG AAIVDIPLQP VSKNIFDVDS YPLERIAMTT GGDAINEATI
60 70 80 90 100
ISRLGHRTAL MSRIGKDAAG QFILDHCRKE NIDIQSLKQD VSIDTSINVG
110 120 130 140 150
LVTEDGERTF VTNRNGSLWK LNIDDVDFAR FSQAKLLSLA SIFNSPLLDG
160 170 180 190 200
KALTEIFTQA KARQMIICAD MIKPRLNETL DDICEALSYV DYLFPNFAEA
210 220 230 240 250
KLLTGKETLD EIADCFLACG VKTVVIKTGK DGCFIKRGDM TMKVPAVAGI
260 270 280 290 300
TAIDTIGAGD NFASGFIAAL LEGKNLRECA RFANATAAIS VLSVGATTGV
310
KNRKLVEQLL EEYEG
Length:315
Mass (Da):34,121
Last modified:December 15, 1998 - v2
Checksum:i9E9BD9E2B617B2A7
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC74842.2
AP009048 Genomic DNA Translation: BAA15563.2
PIRiD64937
RefSeqiNP_416286.4, NC_000913.3
WP_000369231.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74842; AAC74842; b1772
BAA15563; BAA15563; BAA15563
GeneIDi946285
KEGGiecj:JW5289
eco:b1772
PATRICifig|1411691.4.peg.482

Similar proteinsi

Entry informationi

Entry nameiYDJH_ECOLI
AccessioniPrimary (citable) accession number: P77493
Entry historyiIntegrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: December 15, 1998
Last modified: March 28, 2018
This is version 112 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

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