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Protein

Putative uncharacterized ABC transporter ATP-binding protein YcjV

Gene

ycjV

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein uncertaini

Functioni

Caution

Could be the product of a pseudogene.Curated

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi37 – 44ATPPROSITE-ProRule annotation8

GO - Molecular functioni

Keywordsi

Biological processTransport
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciEcoCyc:MONOMER0-2667
EcoCyc:YCJV-MONOMER

Protein family/group databases

TCDBi3.A.1.1.46 the atp-binding cassette (abc) superfamily

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized ABC transporter ATP-binding protein YcjV
Gene namesi
Name:ycjV
Synonyms:ymjB
Ordered Locus Names:b4524, JW1311/JW5203
ORF Names:b1318
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13919 ycjV

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000931611 – 360Putative uncharacterized ABC transporter ATP-binding protein YcjVAdd BLAST360

Proteomic databases

PRIDEiP77481

Interactioni

Protein-protein interaction databases

BioGridi426014411 interactors.
42601459 interactors.
DIPiDIP-11613N
STRINGi316407.1742155

Structurei

3D structure databases

ProteinModelPortaliP77481
SMRiP77481
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini4 – 235ABC transporterPROSITE-ProRule annotationAdd BLAST232

Sequence similaritiesi

Belongs to the ABC transporter superfamily.Curated

Phylogenomic databases

eggNOGiENOG4108IJ9 Bacteria
COG3839 LUCA
InParanoidiP77481
KOiK10112
OMAiFGLRMST
PhylomeDBiP77481

Family and domain databases

InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR003439 ABC_transporter-like
IPR017871 ABC_transporter_CS
IPR008995 Mo/tungstate-bd_C_term_dom
IPR027417 P-loop_NTPase
IPR013611 Transp-assoc_OB_typ2
PfamiView protein in Pfam
PF00005 ABC_tran, 1 hit
PF08402 TOBE_2, 1 hit
SMARTiView protein in SMART
SM00382 AAA, 1 hit
SUPFAMiSSF50331 SSF50331, 1 hit
SSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS00211 ABC_TRANSPORTER_1, 1 hit
PS50893 ABC_TRANSPORTER_2, 1 hit

Sequencei

Sequence statusi: Complete.

P77481-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MAQLSLQHIQ KIYDNQVHVV KDFNLEIADK EFIVFVGPSG CGKSTTLRMI
60 70 80 90 100
AGLEEISGGD LLIDGKRMND VPAKARNIAM VFQNYALYPH MTVYDNMAFG
110 120 130 140 150
LKMQKIAKEV IDERVNWAAQ ILGLREYLKR KPGALSGGQR QRVALGRAIV
160 170 180 190 200
REAGVFLMDE PLSNLDAKLR VQMRAEISKL HQKLNTTMIY VTHDQTEAMT
210 220 230 240 250
MATRIVIMKD GIVQQVGAPK TVYNQPANMF VSGFIGSPAM NFIRGTIDGD
260 270 280 290 300
KFVTETLKLT IPEEKLAVLK TQESLHKPIV MGIRPEDIHP DAQEENNISA
310 320 330 340 350
KISVAELTGA EFMLYTTVGG HELVVRAGAL NDYHAGENIT IHFDMTKCHF
360
FDAETEIAIR
Length:360
Mass (Da):40,147
Last modified:November 28, 2006 - v2
Checksum:iA43741ED7034DA46
GO

Sequence cautioni

The sequence AAC34719 differs from that shown. Reason: Frameshift at position 321.Curated
The sequence BAA14893 differs from that shown. Reason: Frameshift at position 321.Curated
The sequence BAE76400 differs from that shown. Reason: Frameshift at position 321.Curated
The sequence U00096 differs from that shown. Reason: Frameshift at position 321.Curated

Experimental Info

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Sequence conflicti37 – 38GP → AA in AAC34719 (PubMed:9721282).Curated2

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U49400 Genomic DNA Translation: AAC34719.1 Frameshift.
U00096 Genomic DNA No translation available.
AP009048 Genomic DNA Translation: BAA14893.1 Frameshift.
AP009048 Genomic DNA Translation: BAE76400.1 Frameshift.
PIRiA64881

Genome annotation databases

EnsemblBacteriaiBAA14893; BAA14893; BAA14893
BAE76400; BAE76400; BAE76400
KEGGiecj:JW1311
ecj:JW5203

Similar proteinsi

Entry informationi

Entry nameiYCJV_ECOLI
AccessioniPrimary (citable) accession number: P77481
Secondary accession number(s): P76842, Q2EER6, Q2MBF6
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: November 28, 2006
Last modified: March 28, 2018
This is version 125 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome