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Protein

Inner membrane transport protein YbaT

Gene

ybaT

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Probable amino-acid or metabolite transport protein.

GO - Molecular functioni

GO - Biological processi

  • amino acid transport Source: UniProtKB-KW
  • response to pH Source: EcoCyc

Keywordsi

Biological processAmino-acid transport, Transport

Enzyme and pathway databases

BioCyciEcoCyc:B0486-MONOMER

Protein family/group databases

TCDBi2.A.3.6.4 the amino acid-polyamine-organocation (apc) family

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane transport protein YbaT
Gene namesi
Name:ybaT
Ordered Locus Names:b0486, JW0475
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13248 ybaT

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 14CytoplasmicSequence analysisAdd BLAST14
Transmembranei15 – 35HelicalSequence analysisAdd BLAST21
Topological domaini36 – 38PeriplasmicSequence analysis3
Transmembranei39 – 59HelicalSequence analysisAdd BLAST21
Topological domaini60 – 88CytoplasmicSequence analysisAdd BLAST29
Transmembranei89 – 109HelicalSequence analysisAdd BLAST21
Topological domaini110 – 128PeriplasmicSequence analysisAdd BLAST19
Transmembranei129 – 149HelicalSequence analysisAdd BLAST21
Topological domaini150 – 157CytoplasmicSequence analysis8
Transmembranei158 – 178HelicalSequence analysisAdd BLAST21
Topological domaini179 – 192PeriplasmicSequence analysisAdd BLAST14
Transmembranei193 – 213HelicalSequence analysisAdd BLAST21
Topological domaini214 – 228CytoplasmicSequence analysisAdd BLAST15
Transmembranei229 – 249HelicalSequence analysisAdd BLAST21
Topological domaini250 – 272PeriplasmicSequence analysisAdd BLAST23
Transmembranei273 – 293HelicalSequence analysisAdd BLAST21
Topological domaini294 – 325CytoplasmicSequence analysisAdd BLAST32
Transmembranei326 – 346HelicalSequence analysisAdd BLAST21
Topological domaini347PeriplasmicSequence analysis1
Transmembranei348 – 368HelicalSequence analysisAdd BLAST21
Topological domaini369 – 379CytoplasmicSequence analysisAdd BLAST11
Transmembranei380 – 400HelicalSequence analysisAdd BLAST21
Topological domaini401 – 403PeriplasmicSequence analysis3
Transmembranei404 – 424HelicalSequence analysisAdd BLAST21
Topological domaini425 – 430CytoplasmicSequence analysis6

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000542141 – 430Inner membrane transport protein YbaTAdd BLAST430

Proteomic databases

PaxDbiP77400
PRIDEiP77400

Interactioni

Protein-protein interaction databases

BioGridi4261285, 128 interactors
DIPiDIP-11308N
IntActiP77400, 1 interactor
STRINGi316385.ECDH10B_0443

Structurei

3D structure databases

ProteinModelPortaliP77400
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4107RY6 Bacteria
COG0531 LUCA
HOGENOMiHOG000050034
InParanoidiP77400
OMAiINCYNVK
PhylomeDBiP77400

Family and domain databases

InterProiView protein in InterPro
IPR002293 AA/rel_permease1
PfamiView protein in Pfam
PF13520 AA_permease_2, 1 hit
PIRSFiPIRSF006060 AA_transporter, 1 hit

Sequencei

Sequence statusi: Complete.

P77400-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MMNTEGNNGN KPLGLWNVVS IGIGAMVGAG IFALLGQAAL LMEASTWVAF
60 70 80 90 100
AFGGIVAMFS GYAYARLGAS YPSNGGIIDF FRRGLGNGVF SLALSLLYLL
110 120 130 140 150
TLAVSIAMVA RAFGAYAVQF LHEGSQEEHL ILLYALGIIA VMTLFNSLSN
160 170 180 190 200
HAVGRLEVIL VGIKMMILLL LIIAGVWSLQ PAHISVSAPP SSGAFFSCIG
210 220 230 240 250
ITFLAYAGFG MMANAADKVK DPQVIMPRAF LVAIGVTTLL YISLALVLLS
260 270 280 290 300
DVSALELEKY ADTAVAQAAS PLLGHVGYVI VVIGALLATA SAINANLFAV
310 320 330 340 350
FNIMDNMGSE RELPKLMNKS LWRQSTWGNI IVVVLIMLMT AALNLGSLAS
360 370 380 390 400
VASATFLICY LAVFVVAIRL RHDIHASLPI LIVGTLVMLL VIVGFIYSLW
410 420 430
SQGSRALIWI IGSLLLSLIV AMVMKRNKTV
Length:430
Mass (Da):45,659
Last modified:February 1, 1997 - v1
Checksum:i7D6ACD50AD253FE9
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U82664 Genomic DNA Translation: AAB40240.1
U00096 Genomic DNA Translation: AAC73588.1
AP009048 Genomic DNA Translation: BAE76265.1
PIRiE64779
RefSeqiNP_415019.1, NC_000913.3
WP_000982172.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC73588; AAC73588; b0486
BAE76265; BAE76265; BAE76265
GeneIDi945363
KEGGiecj:JW0475
eco:b0486
PATRICifig|1411691.4.peg.1790

Similar proteinsi

Entry informationi

Entry nameiYBAT_ECOLI
AccessioniPrimary (citable) accession number: P77400
Secondary accession number(s): Q2MBU1
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: March 28, 2018
This is version 132 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health