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Protein

Inner membrane transport protein YdhP

Gene

ydhP

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Keywordsi

Biological processTransport

Enzyme and pathway databases

BioCyciEcoCyc:B1657-MONOMER

Protein family/group databases

TCDBi2.A.1.2.65 the major facilitator superfamily (mfs)

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane transport protein YdhP
Gene namesi
Name:ydhP
Ordered Locus Names:b1657, JW1649
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13950 ydhP

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 6CytoplasmicSequence analysis6
Transmembranei7 – 27HelicalSequence analysisAdd BLAST21
Topological domaini28 – 43PeriplasmicSequence analysisAdd BLAST16
Transmembranei44 – 64HelicalSequence analysisAdd BLAST21
Topological domaini65 – 70CytoplasmicSequence analysis6
Transmembranei71 – 91HelicalSequence analysisAdd BLAST21
Topological domaini92 – 100PeriplasmicSequence analysis9
Transmembranei101 – 121HelicalSequence analysisAdd BLAST21
Topological domaini122 – 130CytoplasmicSequence analysis9
Transmembranei131 – 151HelicalSequence analysisAdd BLAST21
Topological domaini152 – 159PeriplasmicSequence analysis8
Transmembranei160 – 180HelicalSequence analysisAdd BLAST21
Topological domaini181 – 203CytoplasmicSequence analysisAdd BLAST23
Transmembranei204 – 224HelicalSequence analysisAdd BLAST21
Topological domaini225 – 236PeriplasmicSequence analysisAdd BLAST12
Transmembranei237 – 257HelicalSequence analysisAdd BLAST21
Topological domaini258 – 266CytoplasmicSequence analysis9
Transmembranei267 – 287HelicalSequence analysisAdd BLAST21
Topological domaini288 – 290PeriplasmicSequence analysis3
Transmembranei291 – 311HelicalSequence analysisAdd BLAST21
Topological domaini312 – 330CytoplasmicSequence analysisAdd BLAST19
Transmembranei331 – 351HelicalSequence analysisAdd BLAST21
Topological domaini352 – 356PeriplasmicSequence analysis5
Transmembranei357 – 377HelicalSequence analysisAdd BLAST21
Topological domaini378 – 389CytoplasmicSequence analysisAdd BLAST12

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001734021 – 389Inner membrane transport protein YdhPAdd BLAST389

Proteomic databases

PaxDbiP77389
PRIDEiP77389

Interactioni

Protein-protein interaction databases

BioGridi4260270, 170 interactors
STRINGi316385.ECDH10B_1791

Structurei

3D structure databases

ProteinModelPortaliP77389
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the major facilitator superfamily.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105F27 Bacteria
COG2814 LUCA
HOGENOMiHOG000136927
InParanoidiP77389
KOiK19577
OMAiKSFEMES
PhylomeDBiP77389

Family and domain databases

CDDicd06174 MFS, 1 hit
InterProiView protein in InterPro
IPR011701 MFS
IPR020846 MFS_dom
IPR036259 MFS_trans_sf
PfamiView protein in Pfam
PF07690 MFS_1, 1 hit
SUPFAMiSSF103473 SSF103473, 1 hit
PROSITEiView protein in PROSITE
PS50850 MFS, 1 hit

Sequencei

Sequence statusi: Complete.

P77389-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKINYPLLAL AIGAFGIGTT EFSPMGLLPV IARGVDVSIP AAGMLISAYA
60 70 80 90 100
VGVMVGAPLM TLLLSHRARR SALIFLMAIF TLGNVLSAIA PDYMTLMLSR
110 120 130 140 150
ILTSLNHGAF FGLGSVVAAS VVPKHKQASA VATMFMGLTL ANIGGVPAAT
160 170 180 190 200
WLGETIGWRM SFLATAGLGV ISMVSLFFSL PKGGAGARPE VKKELAVLMR
210 220 230 240 250
PQVLSALLTT VLGAGAMFTL YTYISPVLQS ITHATPVFVT AMLVLIGVGF
260 270 280 290 300
SIGNYLGGKL ADRSVNGTLK GFLLLLMVIM LAIPFLARNE FGAAISMVVW
310 320 330 340 350
GAATFAVVPP LQMRVMRVAS EAPGLSSSVN IGAFNLGNAL GAAAGGAVIS
360 370 380
AGLGYSFVPV MGAIVAGLAL LLVFMSARKQ PETVCVANS
Length:389
Mass (Da):40,064
Last modified:February 1, 1997 - v1
Checksum:i90A6A22CBD565BF3
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC74729.1
AP009048 Genomic DNA Translation: BAA15423.1
PIRiC64923
RefSeqiNP_416174.1, NC_000913.3
WP_000701040.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74729; AAC74729; b1657
BAA15423; BAA15423; BAA15423
GeneIDi947340
KEGGiecj:JW1649
eco:b1657
PATRICifig|1411691.4.peg.601

Similar proteinsi

Entry informationi

Entry nameiYDHP_ECOLI
AccessioniPrimary (citable) accession number: P77389
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 16, 2002
Last sequence update: February 1, 1997
Last modified: March 28, 2018
This is version 122 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health