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Protein

Probable electron transfer flavoprotein-quinone oxidoreductase YdiS

Gene

ydiS

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Probably accepts electrons from YdiQ/YdiR and reduces a quinone.

Cofactori

FADCurated

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi8 – 2215FADSequence analysisAdd
BLAST

GO - Molecular functioni

Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Ligandi

FAD, Flavoprotein

Enzyme and pathway databases

BioCyciEcoCyc:G6922-MONOMER.
ECOL316407:JW1689-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Probable electron transfer flavoprotein-quinone oxidoreductase YdiS (EC:1.5.5.-)
Gene namesi
Name:ydiS
Ordered Locus Names:b1699, JW1689
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13978. ydiS.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 429429Probable electron transfer flavoprotein-quinone oxidoreductase YdiSPRO_0000200696Add
BLAST

Proteomic databases

PaxDbiP77337.
PRIDEiP77337.

Interactioni

Protein-protein interaction databases

BioGridi4260294. 234 interactions.
IntActiP77337. 5 interactions.
STRINGi511145.b1699.

Structurei

3D structure databases

ProteinModelPortaliP77337.
SMRiP77337. Positions 3-367.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the ETF-QO/FixC family.Curated

Phylogenomic databases

eggNOGiENOG4105DWH. Bacteria.
COG0644. LUCA.
HOGENOMiHOG000018936.
InParanoidiP77337.
KOiK00313.
OMAiHREGSNM.
OrthoDBiEOG6716K7.
PhylomeDBiP77337.

Family and domain databases

Gene3Di3.50.50.60. 2 hits.
InterProiIPR002938. FAD-bd.
IPR023753. FAD/NAD-binding_dom.
[Graphical view]
PfamiPF01494. FAD_binding_3. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.

Sequencei

Sequence statusi: Complete.

P77337-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MSDDKFDAIV VGAGVAGSVA ALVMARAGLD VLVIERGDSA GCKNMTGGRL
60 70 80 90 100
YAHTLEAIIP GFAVSAPVER KVTREKISFL TEESAVTLDF HREQPDVPQH
110 120 130 140 150
ASYTVLRNRL DPWLMEQAEQ AGAQFIPGVR VDALVREGNK VTGVQAGDDI
160 170 180 190 200
LEANVVILAD GVNSMLGRSL GMVPASDPHH YAVGVKEVIG LTPEQINDRF
210 220 230 240 250
NITGEEGAAW LFAGSPSDGL MGGGFLYTNK DSISLGLVCG LGDIAHAQKS
260 270 280 290 300
VPQMLEDFKQ HPAIRPLISG GKLLEYSAHM VPEGGLAMVP QLVNEGVMIV
310 320 330 340 350
GDAAGFCLNL GFTVRGMDLA IASAQAAATT VIAAKERADF SASSLAQYKR
360 370 380 390 400
ELEQSCVMRD MQHFRKIPAL MENPRLFSQY PRMVADIMNE MFTIDGKPNQ
410 420
PVRKMIMGHA KKIGLINLLK DGIKGATAL
Length:429
Mass (Da):45,923
Last modified:February 1, 1997 - v1
Checksum:i860789D79EDA6FA2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74769.1.
AP009048 Genomic DNA. Translation: BAA15468.1.
PIRiC64928.
RefSeqiNP_416214.1. NC_000913.3.
WP_001278525.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74769; AAC74769; b1699.
BAA15468; BAA15468; BAA15468.
GeneIDi946212.
KEGGiecj:JW1689.
eco:b1699.
PATRICi32118704. VBIEscCol129921_1770.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74769.1.
AP009048 Genomic DNA. Translation: BAA15468.1.
PIRiC64928.
RefSeqiNP_416214.1. NC_000913.3.
WP_001278525.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP77337.
SMRiP77337. Positions 3-367.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260294. 234 interactions.
IntActiP77337. 5 interactions.
STRINGi511145.b1699.

Proteomic databases

PaxDbiP77337.
PRIDEiP77337.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74769; AAC74769; b1699.
BAA15468; BAA15468; BAA15468.
GeneIDi946212.
KEGGiecj:JW1689.
eco:b1699.
PATRICi32118704. VBIEscCol129921_1770.

Organism-specific databases

EchoBASEiEB3735.
EcoGeneiEG13978. ydiS.

Phylogenomic databases

eggNOGiENOG4105DWH. Bacteria.
COG0644. LUCA.
HOGENOMiHOG000018936.
InParanoidiP77337.
KOiK00313.
OMAiHREGSNM.
OrthoDBiEOG6716K7.
PhylomeDBiP77337.

Enzyme and pathway databases

BioCyciEcoCyc:G6922-MONOMER.
ECOL316407:JW1689-MONOMER.

Miscellaneous databases

PROiP77337.

Family and domain databases

Gene3Di3.50.50.60. 2 hits.
InterProiIPR002938. FAD-bd.
IPR023753. FAD/NAD-binding_dom.
[Graphical view]
PfamiPF01494. FAD_binding_3. 1 hit.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 2 hits.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYDIS_ECOLI
AccessioniPrimary (citable) accession number: P77337
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: January 20, 2016
This is version 117 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.