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Protein

Uncharacterized zinc-type alcohol dehydrogenase-like protein YbdR

Gene

ybdR

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Cofactori

Zn2+By similarityNote: Binds 2 Zn2+ ions per subunit.By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi38Zinc 1; catalyticBy similarity1
Metal bindingi60Zinc 1; catalyticBy similarity1
Metal bindingi90Zinc 2By similarity1
Metal bindingi93Zinc 2By similarity1
Metal bindingi96Zinc 2By similarity1
Metal bindingi104Zinc 2By similarity1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductase
LigandMetal-binding, Zinc

Enzyme and pathway databases

BioCyciEcoCyc:G6335-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized zinc-type alcohol dehydrogenase-like protein YbdR (EC:1.-.-.-)
Gene namesi
Name:ybdR
Ordered Locus Names:b0608, JW0601
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13537 ybdR

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001608891 – 412Uncharacterized zinc-type alcohol dehydrogenase-like protein YbdRAdd BLAST412

Proteomic databases

PaxDbiP77316
PRIDEiP77316

Interactioni

Protein-protein interaction databases

BioGridi4259897, 8 interactors
DIPiDIP-11355N
IntActiP77316, 6 interactors
STRINGi316385.ECDH10B_0677

Structurei

3D structure databases

ProteinModelPortaliP77316
SMRiP77316
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4105E2A Bacteria
COG1063 LUCA
HOGENOMiHOG000294694
InParanoidiP77316
OMAiVGYTNHF
PhylomeDBiP77316

Family and domain databases

InterProiView protein in InterPro
IPR013149 ADH_C
IPR013154 ADH_N
IPR027399 ADH_N_assoc
IPR002328 ADH_Zn_CS
IPR011032 GroES-like_sf
IPR036291 NAD(P)-bd_dom_sf
PfamiView protein in Pfam
PF08240 ADH_N, 1 hit
PF13823 ADH_N_assoc, 1 hit
PF00107 ADH_zinc_N, 1 hit
SUPFAMiSSF50129 SSF50129, 1 hit
SSF51735 SSF51735, 1 hit
PROSITEiView protein in PROSITE
PS00059 ADH_ZINC, 1 hit

Sequencei

Sequence statusi: Complete.

P77316-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKALTYHGPH HVQVENVPDP GVEQADDIIL RITATAICGS DLHLYRGKIP
60 70 80 90 100
QVKHGDIFGH EFMGEVVETG KDVKNLQKGD RVVIPFVIAC GDCFFCRLQQ
110 120 130 140 150
YAACENTNAG KGAALNKKQI PAPAALFGYS HLYGGVPGGQ AEYVRVPKGN
160 170 180 190 200
VGPFKVPPLL SDDKALFLSD ILPTAWQAAK NAQIQQGSSV AVYGAGPVGL
210 220 230 240 250
LTIACARLLG AEQIFVVDHH PYRLHFAADR YGAIPINFDE DSDPAQSIIE
260 270 280 290 300
QTAGHRGVDA VIDAVGFEAK GSTTETVLTN LKLEGSSGKA LRQCIAAVRR
310 320 330 340 350
GGIVSVPGVY AGFIHGFLFG DAFDKGLSFK MGQTHVHAWL GELLPLIEKG
360 370 380 390 400
LLKPEEIVTH YMPFEEAARG YEIFEKREEE CRKVILVPGA QSAEAAQKAV
410
SGLVNAMPGG TI
Length:412
Mass (Da):44,176
Last modified:February 1, 1997 - v1
Checksum:i966BB43A8FAB178D
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U82598 Genomic DNA Translation: AAB40809.1
U00096 Genomic DNA Translation: AAC73709.1
AP009048 Genomic DNA Translation: BAA35238.1
PIRiF64794
RefSeqiNP_415141.1, NC_000913.3
WP_000646173.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC73709; AAC73709; b0608
BAA35238; BAA35238; BAA35238
GeneIDi949067
KEGGiecj:JW0601
eco:b0608
PATRICifig|1411691.4.peg.1660

Similar proteinsi

Entry informationi

Entry nameiYBDR_ECOLI
AccessioniPrimary (citable) accession number: P77316
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: March 28, 2018
This is version 132 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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