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Protein

Uncharacterized HTH-type transcriptional regulator YneJ

Gene

yneJ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein predictedi

Functioni

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
DNA bindingi18 – 38H-T-H motifPROSITE-ProRule annotationAdd BLAST21

GO - Molecular functioni

GO - Biological processi

  • transcription, DNA-templated Source: EcoCyc

Keywordsi

Molecular functionDNA-binding
Biological processTranscription, Transcription regulation

Enzyme and pathway databases

BioCyciEcoCyc:G6812-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized HTH-type transcriptional regulator YneJ
Gene namesi
Name:yneJ
Ordered Locus Names:b1526, JW1519
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13818 yneJ

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001058081 – 293Uncharacterized HTH-type transcriptional regulator YneJAdd BLAST293

Proteomic databases

PaxDbiP77309
PRIDEiP77309

Interactioni

Protein-protein interaction databases

BioGridi4261696, 4 interactors
IntActiP77309, 2 interactors
STRINGi316385.ECDH10B_1657

Structurei

3D structure databases

ProteinModelPortaliP77309
SMRiP77309
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini1 – 58HTH lysR-typePROSITE-ProRule annotationAdd BLAST58

Phylogenomic databases

eggNOGiENOG4105EGI Bacteria
ENOG410XR3F LUCA
HOGENOMiHOG000233521
InParanoidiP77309
OMAiAFERGCT
PhylomeDBiP77309

Family and domain databases

Gene3Di1.10.10.10, 1 hit
InterProiView protein in InterPro
IPR005119 LysR_subst-bd
IPR000847 Tscrpt_reg_HTH_LysR
IPR036388 WH-like_DNA-bd_sf
IPR036390 WH_DNA-bd_sf
PfamiView protein in Pfam
PF00126 HTH_1, 1 hit
PF03466 LysR_substrate, 1 hit
SUPFAMiSSF46785 SSF46785, 1 hit
PROSITEiView protein in PROSITE
PS50931 HTH_LYSR, 1 hit

Sequencei

Sequence statusi: Complete.

P77309-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDLTQLEMFN AVAEAGSITQ AAAKVHRVPS NLTTRLRQLE TELGVDLFIR
60 70 80 90 100
ENQRLRLSPA GHNFLRYSQQ ILALVDEARS VVAGDEPQGL FSLGSLESTA
110 120 130 140 150
AVRIPATLAE FNRRYPKIQF SLSTGPSGTM LDGVLEGKLN AAFIDGPINH
160 170 180 190 200
TAIDGIPVYR EELMIVTPQG YAPVTRASQV NGSNIYAFRA NCSYRRHFES
210 220 230 240 250
WFHADGAAPG TIHEMESYHG MLACVIAGAG IALIPRSMLE SMPGHHQVEA
260 270 280 290
WPLAEQWRWL TTWLVWRRGA KTRPLEAFIQ LLDVPDSARQ GYQ
Length:293
Mass (Da):32,483
Last modified:February 1, 1997 - v1
Checksum:iF50C3F3237AD923B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC74599.1
AP009048 Genomic DNA Translation: BAA15209.1
PIRiA64907
RefSeqiNP_416043.1, NC_000913.3
WP_000366501.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74599; AAC74599; b1526
BAA15209; BAA15209; BAA15209
GeneIDi946079
KEGGiecj:JW1519
eco:b1526
PATRICifig|1411691.4.peg.740

Similar proteinsi

Entry informationi

Entry nameiYNEJ_ECOLI
AccessioniPrimary (citable) accession number: P77309
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: March 28, 2018
This is version 124 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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