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Protein

Uncharacterized protein YbaP

Gene

ybaP

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6258-MONOMER.
ECOL316407:JW0471-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YbaP
Gene namesi
Name:ybaP
Ordered Locus Names:b0482, JW0471
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13244. ybaP.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 264264Uncharacterized protein YbaPPRO_0000168628Add
BLAST

Proteomic databases

PaxDbiP77301.
PRIDEiP77301.

Interactioni

Protein-protein interaction databases

BioGridi4261398. 8 interactions.
IntActiP77301. 12 interactions.
STRINGi511145.b0482.

Structurei

3D structure databases

ProteinModelPortaliP77301.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105MBR. Bacteria.
COG3735. LUCA.
HOGENOMiHOG000117687.
InParanoidiP77301.
KOiK09973.
OMAiLQTMISW.
OrthoDBiEOG6PP9J6.

Family and domain databases

InterProiIPR002816. Pheromone_shutdown_TraB.
[Graphical view]
PfamiPF01963. TraB. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P77301-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDLLYRVKTL WAALRGNHYT WPAIDITLPG NRHFHLIGSI HMGSHDMAPL
60 70 80 90 100
PTRLLKKLKN ADALIVEADV STSDTPFANL PACEALEERI SEEQLQNLQH
110 120 130 140 150
ISQEMGISPS LFSTQPLWQI AMVLQATQAQ KLGLRAEYGI DYQLLQAAKQ
160 170 180 190 200
QHKPVIELEG AENQIAMLLQ LPDKGLALLD DTLTHWHTNA RLLQQMMSWW
210 220 230 240 250
LNAPPQNNDI TLPNTFSQSL YDVLMHQRNL AWRDKLRAMP PGRYVVAVGA
260
LHLYGEGNLP QMLR
Length:264
Mass (Da):29,902
Last modified:February 1, 1997 - v1
Checksum:i697DC2BE91D8F0B6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U82664 Genomic DNA. Translation: AAB40236.1.
U00096 Genomic DNA. Translation: AAC73584.1.
AP009048 Genomic DNA. Translation: BAE76261.1.
PIRiA64779.
RefSeqiNP_415015.1. NC_000913.3.
WP_000365173.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73584; AAC73584; b0482.
BAE76261; BAE76261; BAE76261.
GeneIDi945124.
KEGGiecj:JW0471.
eco:b0482.
PATRICi32116121. VBIEscCol129921_0502.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U82664 Genomic DNA. Translation: AAB40236.1.
U00096 Genomic DNA. Translation: AAC73584.1.
AP009048 Genomic DNA. Translation: BAE76261.1.
PIRiA64779.
RefSeqiNP_415015.1. NC_000913.3.
WP_000365173.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP77301.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261398. 8 interactions.
IntActiP77301. 12 interactions.
STRINGi511145.b0482.

Proteomic databases

PaxDbiP77301.
PRIDEiP77301.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73584; AAC73584; b0482.
BAE76261; BAE76261; BAE76261.
GeneIDi945124.
KEGGiecj:JW0471.
eco:b0482.
PATRICi32116121. VBIEscCol129921_0502.

Organism-specific databases

EchoBASEiEB3033.
EcoGeneiEG13244. ybaP.

Phylogenomic databases

eggNOGiENOG4105MBR. Bacteria.
COG3735. LUCA.
HOGENOMiHOG000117687.
InParanoidiP77301.
KOiK09973.
OMAiLQTMISW.
OrthoDBiEOG6PP9J6.

Enzyme and pathway databases

BioCyciEcoCyc:G6258-MONOMER.
ECOL316407:JW0471-MONOMER.

Miscellaneous databases

PROiP77301.

Family and domain databases

InterProiIPR002816. Pheromone_shutdown_TraB.
[Graphical view]
PfamiPF01963. TraB. 1 hit.
[Graphical view]
ProtoNetiSearch...

Publicationsi

  1. "Sequence of minutes 4-25 of Escherichia coli."
    Chung E., Allen E., Araujo R., Aparicio A.M., Davis K., Duncan M., Federspiel N., Hyman R., Kalman S., Komp C., Kurdi O., Lew H., Lin D., Namath A., Oefner P., Roberts D., Schramm S., Davis R.W.
    Submitted (JAN-1997) to the EMBL/GenBank/DDBJ databases
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYBAP_ECOLI
AccessioniPrimary (citable) accession number: P77301
Secondary accession number(s): Q2MBU5
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: January 20, 2016
This is version 87 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.