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Protein

Prophage bactoprenol glucosyl transferase homolog

Gene

yfdH

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Involved in O antigen modification. Catalyzes the transfer of the glucose residue from UDP-glucose to a lipid carrier (By similarity).By similarity

GO - Molecular functioni

Keywordsi

Molecular functionGlycosyltransferase, Transferase

Enzyme and pathway databases

BioCyciEcoCyc:G7220-MONOMER

Protein family/group databases

CAZyiGT2 Glycosyltransferase Family 2

Names & Taxonomyi

Protein namesi
Recommended name:
Prophage bactoprenol glucosyl transferase homologCurated (EC:2.4.1.-)
Alternative name(s):
Bactoprenol glucosyl transferase homolog from prophage CPS-53
Gene namesi
Name:yfdH
Ordered Locus Names:b2351, JW2347
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14132 yfdH

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 227CytoplasmicSequence analysisAdd BLAST227
Transmembranei228 – 248HelicalSequence analysisAdd BLAST21
Topological domaini249 – 262PeriplasmicSequence analysisAdd BLAST14
Transmembranei263 – 283HelicalSequence analysisAdd BLAST21
Topological domaini284 – 306CytoplasmicSequence analysisAdd BLAST23

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000591941 – 306Prophage bactoprenol glucosyl transferase homologAdd BLAST306

Proteomic databases

PaxDbiP77293
PRIDEiP77293

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
fadJP773992EBI-545379,EBI-545361

Protein-protein interaction databases

BioGridi4260542, 226 interactors
DIPiDIP-11997N
IntActiP77293, 1 interactor
STRINGi316385.ECDH10B_2514

Structurei

3D structure databases

ProteinModelPortaliP77293
SMRiP77293
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105CKK Bacteria
COG0463 LUCA
HOGENOMiHOG000283247
InParanoidiP77293
KOiK20534
OMAiPLRMWTY
PhylomeDBiP77293

Family and domain databases

Gene3Di3.90.550.10, 1 hit
InterProiView protein in InterPro
IPR001173 Glyco_trans_2-like
IPR029044 Nucleotide-diphossugar_trans
PfamiView protein in Pfam
PF00535 Glycos_transf_2, 1 hit
SUPFAMiSSF53448 SSF53448, 1 hit

Sequencei

Sequence statusi: Complete.

P77293-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKISLVVPVF NEEEAIPIFY KTVREFEELK SYEVEIVFIN DGSKDATESI
60 70 80 90 100
INALAVSDPL VVPLSFTRNF GKEPALFAGL DHATGDAIIP IDVDLQDPIE
110 120 130 140 150
VIPHLIEKWQ AGADMVLAKR SDRSTDGRLK RKTAEWFYKL HNKISNPKIE
160 170 180 190 200
ENVGDFRLMS RDVVENIKLM PERNLFMKGI LSWVGGKTDI VEYVRAERIA
210 220 230 240 250
GDTKFNGWKL WNLALEGITS FSTFPLRIWT YIGLVVASVA FIYGAWMILD
260 270 280 290 300
TIIFGNAVRG YPSLLVSILF LGGIQMIGIG VLGEYIGRTY IETKKRPKYI

IKRVKK
Length:306
Mass (Da):34,635
Last modified:February 1, 1997 - v1
Checksum:i600411D3D201B4E6
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC75410.1
AP009048 Genomic DNA Translation: BAA16210.1
PIRiD65008
RefSeqiNP_416852.1, NC_000913.3
WP_000703651.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC75410; AAC75410; b2351
BAA16210; BAA16210; BAA16210
GeneIDi949098
KEGGiecj:JW2347
eco:b2351
PATRICifig|511145.12.peg.2446

Similar proteinsi

Entry informationi

Entry nameiGTRB_ECOLI
AccessioniPrimary (citable) accession number: P77293
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: March 28, 2018
This is version 120 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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