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P77293

- GTRB_ECOLI

UniProt

P77293 - GTRB_ECOLI

Protein

Bactoprenol glucosyl transferase homolog from prophage CPS-53

Gene

yfdH

Organism
Escherichia coli (strain K12)
Status
Reviewed - Annotation score: 2 out of 5- Experimental evidence at protein leveli
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    • History
      Entry version 101 (01 Oct 2014)
      Sequence version 1 (01 Feb 1997)
      Previous versions | rss
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    Functioni

    Involved in O antigen modification. Catalyzes the transfer of the glucose residue from UDP-glucose to a lipid carrier By similarity.By similarity

    GO - Molecular functioni

    1. transferase activity, transferring glycosyl groups Source: UniProtKB-KW

    Keywords - Molecular functioni

    Glycosyltransferase, Transferase

    Enzyme and pathway databases

    BioCyciEcoCyc:G7220-MONOMER.
    ECOL316407:JW2347-MONOMER.

    Protein family/group databases

    CAZyiGT2. Glycosyltransferase Family 2.

    Names & Taxonomyi

    Protein namesi
    Recommended name:
    Bactoprenol glucosyl transferase homolog from prophage CPS-53 (EC:2.4.1.-)
    Gene namesi
    Name:yfdH
    Ordered Locus Names:b2351, JW2347
    OrganismiEscherichia coli (strain K12)
    Taxonomic identifieri83333 [NCBI]
    Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
    ProteomesiUP000000318: Chromosome, UP000000625: Chromosome

    Organism-specific databases

    EcoGeneiEG14132. yfdH.

    Subcellular locationi

    GO - Cellular componenti

    1. integral component of membrane Source: UniProtKB-KW
    2. plasma membrane Source: UniProtKB-SubCell

    Keywords - Cellular componenti

    Cell inner membrane, Cell membrane, Membrane

    PTM / Processingi

    Molecule processing

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Chaini1 – 306306Bactoprenol glucosyl transferase homolog from prophage CPS-53PRO_0000059194Add
    BLAST

    Expressioni

    Gene expression databases

    GenevestigatoriP77293.

    Interactioni

    Protein-protein interaction databases

    DIPiDIP-11997N.
    IntActiP77293. 1 interaction.
    STRINGi511145.b2351.

    Structurei

    3D structure databases

    ProteinModelPortaliP77293.
    ModBaseiSearch...
    MobiDBiSearch...

    Topological domain

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Topological domaini1 – 227227CytoplasmicSequence AnalysisAdd
    BLAST
    Topological domaini249 – 26214PeriplasmicSequence AnalysisAdd
    BLAST
    Topological domaini284 – 30623CytoplasmicSequence AnalysisAdd
    BLAST

    Transmembrane

    Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
    Transmembranei228 – 24821HelicalSequence AnalysisAdd
    BLAST
    Transmembranei263 – 28321HelicalSequence AnalysisAdd
    BLAST

    Family & Domainsi

    Sequence similaritiesi

    Keywords - Domaini

    Transmembrane, Transmembrane helix

    Phylogenomic databases

    eggNOGiCOG0463.
    HOGENOMiHOG000283247.
    OMAiMWTYIGL.
    OrthoDBiEOG65TRV4.
    PhylomeDBiP77293.

    Family and domain databases

    Gene3Di3.90.550.10. 1 hit.
    InterProiIPR001173. Glyco_trans_2-like.
    IPR029044. Nucleotide-diphossugar_trans.
    [Graphical view]
    PfamiPF00535. Glycos_transf_2. 1 hit.
    [Graphical view]
    SUPFAMiSSF53448. SSF53448. 1 hit.

    Sequencei

    Sequence statusi: Complete.

    P77293-1 [UniParc]FASTAAdd to Basket

    « Hide

    MKISLVVPVF NEEEAIPIFY KTVREFEELK SYEVEIVFIN DGSKDATESI    50
    INALAVSDPL VVPLSFTRNF GKEPALFAGL DHATGDAIIP IDVDLQDPIE 100
    VIPHLIEKWQ AGADMVLAKR SDRSTDGRLK RKTAEWFYKL HNKISNPKIE 150
    ENVGDFRLMS RDVVENIKLM PERNLFMKGI LSWVGGKTDI VEYVRAERIA 200
    GDTKFNGWKL WNLALEGITS FSTFPLRIWT YIGLVVASVA FIYGAWMILD 250
    TIIFGNAVRG YPSLLVSILF LGGIQMIGIG VLGEYIGRTY IETKKRPKYI 300
    IKRVKK 306
    Length:306
    Mass (Da):34,635
    Last modified:February 1, 1997 - v1
    Checksum:i600411D3D201B4E6
    GO

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00096 Genomic DNA. Translation: AAC75410.1.
    AP009048 Genomic DNA. Translation: BAA16210.1.
    PIRiD65008.
    RefSeqiNP_416852.1. NC_000913.3.
    YP_490592.1. NC_007779.1.

    Genome annotation databases

    EnsemblBacteriaiAAC75410; AAC75410; b2351.
    BAA16210; BAA16210; BAA16210.
    GeneIDi12931548.
    949098.
    KEGGiecj:Y75_p2316.
    eco:b2351.
    PATRICi32120075. VBIEscCol129921_2446.

    Cross-referencesi

    Sequence databases

    Select the link destinations:
    EMBL
    GenBank
    DDBJ
    Links Updated
    U00096 Genomic DNA. Translation: AAC75410.1 .
    AP009048 Genomic DNA. Translation: BAA16210.1 .
    PIRi D65008.
    RefSeqi NP_416852.1. NC_000913.3.
    YP_490592.1. NC_007779.1.

    3D structure databases

    ProteinModelPortali P77293.
    ModBasei Search...
    MobiDBi Search...

    Protein-protein interaction databases

    DIPi DIP-11997N.
    IntActi P77293. 1 interaction.
    STRINGi 511145.b2351.

    Protein family/group databases

    CAZyi GT2. Glycosyltransferase Family 2.

    Protocols and materials databases

    Structural Biology Knowledgebase Search...

    Genome annotation databases

    EnsemblBacteriai AAC75410 ; AAC75410 ; b2351 .
    BAA16210 ; BAA16210 ; BAA16210 .
    GeneIDi 12931548.
    949098.
    KEGGi ecj:Y75_p2316.
    eco:b2351.
    PATRICi 32120075. VBIEscCol129921_2446.

    Organism-specific databases

    EchoBASEi EB3884.
    EcoGenei EG14132. yfdH.

    Phylogenomic databases

    eggNOGi COG0463.
    HOGENOMi HOG000283247.
    OMAi MWTYIGL.
    OrthoDBi EOG65TRV4.
    PhylomeDBi P77293.

    Enzyme and pathway databases

    BioCyci EcoCyc:G7220-MONOMER.
    ECOL316407:JW2347-MONOMER.

    Miscellaneous databases

    PROi P77293.

    Gene expression databases

    Genevestigatori P77293.

    Family and domain databases

    Gene3Di 3.90.550.10. 1 hit.
    InterProi IPR001173. Glyco_trans_2-like.
    IPR029044. Nucleotide-diphossugar_trans.
    [Graphical view ]
    Pfami PF00535. Glycos_transf_2. 1 hit.
    [Graphical view ]
    SUPFAMi SSF53448. SSF53448. 1 hit.
    ProtoNeti Search...

    Publicationsi

    1. "Construction of a contiguous 874-kb sequence of the Escherichia coli-K12 genome corresponding to 50.0-68.8 min on the linkage map and analysis of its sequence features."
      Yamamoto Y., Aiba H., Baba T., Hayashi K., Inada T., Isono K., Itoh T., Kimura S., Kitagawa M., Makino K., Miki T., Mitsuhashi N., Mizobuchi K., Mori H., Nakade S., Nakamura Y., Nashimoto H., Oshima T.
      , Oyama S., Saito N., Sampei G., Satoh Y., Sivasundaram S., Tagami H., Takahashi H., Takeda J., Takemoto K., Uehara K., Wada C., Yamagata S., Horiuchi T.
      DNA Res. 4:91-113(1997) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
    2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / MG1655 / ATCC 47076.
    3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
      Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
      Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
      Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
      Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
    4. "Global topology analysis of the Escherichia coli inner membrane proteome."
      Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.
      Science 308:1321-1323(2005) [PubMed] [Europe PMC] [Abstract]
      Cited for: TOPOLOGY [LARGE SCALE ANALYSIS].
      Strain: K12 / MG1655 / ATCC 47076.

    Entry informationi

    Entry nameiGTRB_ECOLI
    AccessioniPrimary (citable) accession number: P77293
    Entry historyi
    Integrated into UniProtKB/Swiss-Prot: July 15, 1998
    Last sequence update: February 1, 1997
    Last modified: October 1, 2014
    This is version 101 of the entry and version 1 of the sequence. [Complete history]
    Entry statusiReviewed (UniProtKB/Swiss-Prot)
    Annotation programProkaryotic Protein Annotation Program

    Miscellaneousi

    Keywords - Technical termi

    Complete proteome, Reference proteome

    Documents

    1. Escherichia coli
      Escherichia coli (strain K12): entries and cross-references to EcoGene
    2. SIMILARITY comments
      Index of protein domains and families

    External Data

    Dasty 3