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P77293 (GTRB_ECOLI) Reviewed, UniProtKB/Swiss-Prot

Last modified April 16, 2014. Version 98. Feed History...

Clusters with 100%, 90%, 50% identity | Documents (2) | Third-party data text xml rdf/xml gff fasta
to top of pageNames·Attributes·General annotation·Ontologies·Sequence annotation·Sequences·References·Cross-refs·Entry info·DocumentsCustomize order

Names and origin

Protein namesRecommended name:
Bactoprenol glucosyl transferase homolog from prophage CPS-53

EC=2.4.1.-
Gene names
Name:yfdH
Ordered Locus Names:b2351, JW2347
OrganismEscherichia coli (strain K12) [Reference proteome] [HAMAP]
Taxonomic identifier83333 [NCBI]
Taxonomic lineageBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia

Protein attributes

Sequence length306 AA.
Sequence statusComplete.
Protein existenceEvidence at protein level

General annotation (Comments)

Function

Involved in O antigen modification. Catalyzes the transfer of the glucose residue from UDP-glucose to a lipid carrier By similarity.

Subcellular location

Cell inner membrane; Multi-pass membrane protein.

Sequence similarities

Belongs to the glycosyltransferase 2 family. GtrB subfamily.

Sequence annotation (Features)

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifier

Molecule processing

Chain1 – 306306Bactoprenol glucosyl transferase homolog from prophage CPS-53
PRO_0000059194

Regions

Topological domain1 – 227227Cytoplasmic Potential
Transmembrane228 – 24821Helical; Potential
Topological domain249 – 26214Periplasmic Potential
Transmembrane263 – 28321Helical; Potential
Topological domain284 – 30623Cytoplasmic Potential

Sequences

Sequence LengthMass (Da)Tools
P77293 [UniParc].

Last modified February 1, 1997. Version 1.
Checksum: 600411D3D201B4E6

FASTA30634,635
        10         20         30         40         50         60 
MKISLVVPVF NEEEAIPIFY KTVREFEELK SYEVEIVFIN DGSKDATESI INALAVSDPL 

        70         80         90        100        110        120 
VVPLSFTRNF GKEPALFAGL DHATGDAIIP IDVDLQDPIE VIPHLIEKWQ AGADMVLAKR 

       130        140        150        160        170        180 
SDRSTDGRLK RKTAEWFYKL HNKISNPKIE ENVGDFRLMS RDVVENIKLM PERNLFMKGI 

       190        200        210        220        230        240 
LSWVGGKTDI VEYVRAERIA GDTKFNGWKL WNLALEGITS FSTFPLRIWT YIGLVVASVA 

       250        260        270        280        290        300 
FIYGAWMILD TIIFGNAVRG YPSLLVSILF LGGIQMIGIG VLGEYIGRTY IETKKRPKYI 


IKRVKK 

« Hide

References

[1]"Construction of a contiguous 874-kb sequence of the Escherichia coli-K12 genome corresponding to 50.0-68.8 min on the linkage map and analysis of its sequence features."
Yamamoto Y., Aiba H., Baba T., Hayashi K., Inada T., Isono K., Itoh T., Kimura S., Kitagawa M., Makino K., Miki T., Mitsuhashi N., Mizobuchi K., Mori H., Nakade S., Nakamura Y., Nashimoto H., Oshima T. expand/collapse author list , Oyama S., Saito N., Sampei G., Satoh Y., Sivasundaram S., Tagami H., Takahashi H., Takeda J., Takemoto K., Uehara K., Wada C., Yamagata S., Horiuchi T.
DNA Res. 4:91-113(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[2]"The complete genome sequence of Escherichia coli K-12."
Blattner F.R., Plunkett G. III, Bloch C.A., Perna N.T., Burland V., Riley M., Collado-Vides J., Glasner J.D., Rode C.K., Mayhew G.F., Gregor J., Davis N.W., Kirkpatrick H.A., Goeden M.A., Rose D.J., Mau B., Shao Y.
Science 277:1453-1462(1997) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / MG1655 / ATCC 47076.
[3]"Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
[4]"Global topology analysis of the Escherichia coli inner membrane proteome."
Daley D.O., Rapp M., Granseth E., Melen K., Drew D., von Heijne G.
Science 308:1321-1323(2005) [PubMed] [Europe PMC] [Abstract]
Cited for: TOPOLOGY [LARGE SCALE ANALYSIS].
Strain: K12 / MG1655 / ATCC 47076.

Cross-references

Sequence databases

EMBL
GenBank
DDBJ
U00096 Genomic DNA. Translation: AAC75410.1.
AP009048 Genomic DNA. Translation: BAA16210.1.
PIRD65008.
RefSeqNP_416852.1. NC_000913.3.
YP_490592.1. NC_007779.1.

3D structure databases

ProteinModelPortalP77293.
ModBaseSearch...
MobiDBSearch...

Protein-protein interaction databases

DIPDIP-11997N.
IntActP77293. 1 interaction.
STRING511145.b2351.

Protein family/group databases

CAZyGT2. Glycosyltransferase Family 2.

Protocols and materials databases

StructuralBiologyKnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaAAC75410; AAC75410; b2351.
BAA16210; BAA16210; BAA16210.
GeneID12931548.
949098.
KEGGecj:Y75_p2316.
eco:b2351.
PATRIC32120075. VBIEscCol129921_2446.

Organism-specific databases

EchoBASEEB3884.
EcoGeneEG14132. yfdH.

Phylogenomic databases

eggNOGCOG0463.
HOGENOMHOG000283247.
OMAKLWNFAI.
OrthoDBEOG65TRV4.
PhylomeDBP77293.
ProtClustDBCLSK891776.

Enzyme and pathway databases

BioCycEcoCyc:G7220-MONOMER.
ECOL316407:JW2347-MONOMER.

Gene expression databases

GenevestigatorP77293.

Family and domain databases

InterProIPR001173. Glyco_trans_2-like.
[Graphical view]
PfamPF00535. Glycos_transf_2. 1 hit.
[Graphical view]
ProtoNetSearch...

Other

PROP77293.

Entry information

Entry nameGTRB_ECOLI
AccessionPrimary (citable) accession number: P77293
Entry history
Integrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: April 16, 2014
This is version 98 of the entry and version 1 of the sequence. [Complete history]
Entry statusReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Relevant documents

SIMILARITY comments

Index of protein domains and families

Escherichia coli

Escherichia coli (strain K12): entries and cross-references to EcoGene