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Protein

Uncharacterized protein YdeU

Gene

ydeU

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein uncertaini

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6797-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YdeU
Gene namesi
Name:ydeU
Ordered Locus Names:b1509, JW1502
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Subcellular locationi

GO - Cellular componenti

Complete GO annotation...

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002047311 – 466Uncharacterized protein YdeUAdd BLAST466

Interactioni

Protein-protein interaction databases

IntActiP77286. 8 interactors.
STRINGi316385.ECDH10B_1640.

Structurei

3D structure databases

ProteinModelPortaliP77286.
SMRiP77286.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini178 – 466AutotransporterPROSITE-ProRule annotationAdd BLAST289

Sequence similaritiesi

Contains 1 autotransporter (TC 1.B.12) domain. [View classification]PROSITE-ProRule annotation

Phylogenomic databases

eggNOGiCOG3468. LUCA.
InParanoidiP77286.
OMAiWQANISI.

Family and domain databases

Gene3Di2.160.20.20. 1 hit.
2.40.128.130. 1 hit.
InterProiIPR005546. Autotransporte_beta.
IPR006315. OM_autotransptr_brl.
IPR012332. P22_tailspike_C-like.
IPR011050. Pectin_lyase_fold/virulence.
IPR004899. Pertactin_central.
[Graphical view]
PfamiPF03797. Autotransporter. 1 hit.
PF03212. Pertactin. 1 hit.
[Graphical view]
SMARTiSM00869. Autotransporter. 1 hit.
[Graphical view]
SUPFAMiSSF103515. SSF103515. 1 hit.
SSF51126. SSF51126. 1 hit.
TIGRFAMsiTIGR01414. autotrans_barl. 1 hit.
PROSITEiPS51208. AUTOTRANSPORTER. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P77286-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MNSEGGKPGN VLTVNGNYTG NNGLMTFNAT LGGDNSPTDK MNVKGDTQGN
60 70 80 90 100
TRVRVDNIGG VGAQTVNGIE LIEVGGNSAG NFALTTGTVE AGAYVYTLAK
110 120 130 140 150
GKGNDEKNWY LTSKWDGVTP ADTPDPINNP PVVDPEGPSV YRPEAGSYIS
160 170 180 190 200
NIAAANSLFS HRLHDRLGEP QYTDSLHSQG SASSMWMRHV GGHERSRAGD
210 220 230 240 250
GQLNTQANRY VLQLGGDLAQ WSSNAQDRWH LGVMAGYANQ HSNTQSNRVG
260 270 280 290 300
YKSDGRISGY SAGLYATWYQ NDANKTGAYV DSWALYNWFD NSVSSDNRSA
310 320 330 340 350
DDYDSRGVTA SVEGGYTFEA GTFSGSEGTL NTWYVQPQAQ ITWMGVKDSD
360 370 380 390 400
HTRKDGTRIE TEGDGNVQTR LGVKTYLNSH HQRDDGKQRE FQPYIEANWI
410 420 430 440 450
NNSKVYAVKM NGQTVGREGA RNLGEVRTGV EAKVNNNLSL WGNVGVQLGD
460
KGYSDTQGML GVKYSW
Length:466
Mass (Da):50,539
Last modified:February 1, 1997 - v1
Checksum:iB3E165330864F10C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. No translation available.
PIRiH64904.
RefSeqiWP_001083595.1. NZ_LN832404.1.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. No translation available.
PIRiH64904.
RefSeqiWP_001083595.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP77286.
SMRiP77286.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

IntActiP77286. 8 interactors.
STRINGi316385.ECDH10B_1640.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Organism-specific databases

EchoBASEiEB3564.

Phylogenomic databases

eggNOGiCOG3468. LUCA.
InParanoidiP77286.
OMAiWQANISI.

Enzyme and pathway databases

BioCyciEcoCyc:G6797-MONOMER.

Family and domain databases

Gene3Di2.160.20.20. 1 hit.
2.40.128.130. 1 hit.
InterProiIPR005546. Autotransporte_beta.
IPR006315. OM_autotransptr_brl.
IPR012332. P22_tailspike_C-like.
IPR011050. Pectin_lyase_fold/virulence.
IPR004899. Pertactin_central.
[Graphical view]
PfamiPF03797. Autotransporter. 1 hit.
PF03212. Pertactin. 1 hit.
[Graphical view]
SMARTiSM00869. Autotransporter. 1 hit.
[Graphical view]
SUPFAMiSSF103515. SSF103515. 1 hit.
SSF51126. SSF51126. 1 hit.
TIGRFAMsiTIGR01414. autotrans_barl. 1 hit.
PROSITEiPS51208. AUTOTRANSPORTER. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYDEU_ECOLI
AccessioniPrimary (citable) accession number: P77286
Secondary accession number(s): P76878
Entry historyi
Integrated into UniProtKB/Swiss-Prot: March 27, 2002
Last sequence update: February 1, 1997
Last modified: November 2, 2016
This is version 113 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.