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Protein

Uncharacterized zinc-type alcohol dehydrogenase-like protein YdjJ

Gene

ydjJ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Cofactori

Zn2+By similarityNote: Binds 2 Zn2+ ions per subunit.By similarity

Sites

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Metal bindingi39Zinc 1; catalyticBy similarity1
Metal bindingi65Zinc 1; catalyticBy similarity1
Metal bindingi95Zinc 2By similarity1
Metal bindingi98Zinc 2By similarity1
Metal bindingi101Zinc 2By similarity1
Metal bindingi109Zinc 2By similarity1
Metal bindingi152Zinc 1; catalyticBy similarity1

GO - Molecular functioni

Keywordsi

Molecular functionOxidoreductase
LigandMetal-binding, Zinc

Enzyme and pathway databases

BioCyciEcoCyc:G6961-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized zinc-type alcohol dehydrogenase-like protein YdjJ (EC:1.-.-.-)
Gene namesi
Name:ydjJ
Ordered Locus Names:b1774, JW1763
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13486 ydjJ

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001608921 – 347Uncharacterized zinc-type alcohol dehydrogenase-like protein YdjJAdd BLAST347

Proteomic databases

PaxDbiP77280
PRIDEiP77280

Interactioni

Protein-protein interaction databases

BioGridi4260306, 423 interactors
IntActiP77280, 9 interactors
STRINGi316385.ECDH10B_1912

Structurei

Secondary structure

1347
Legend: HelixTurnBeta strandPDB Structure known for this area
Show more details
Feature keyPosition(s)DescriptionActionsGraphical viewLength
Beta strandi3 – 10Combined sources8
Beta strandi13 – 19Combined sources7
Beta strandi28 – 38Combined sources11
Helixi40 – 48Combined sources9
Beta strandi67 – 74Combined sources8
Beta strandi86 – 89Combined sources4
Beta strandi91 – 93Combined sources3
Beta strandi96 – 98Combined sources3
Helixi99 – 102Combined sources4
Helixi106 – 108Combined sources3
Turni118 – 120Combined sources3
Beta strandi126 – 132Combined sources7
Helixi133 – 135Combined sources3
Beta strandi136 – 138Combined sources3
Helixi145 – 163Combined sources19
Beta strandi171 – 175Combined sources5
Helixi179 – 190Combined sources12
Beta strandi195 – 201Combined sources7
Helixi203 – 211Combined sources9
Beta strandi215 – 219Combined sources5
Turni220 – 222Combined sources3
Helixi225 – 232Combined sources8
Turni233 – 235Combined sources3
Beta strandi238 – 243Combined sources6
Helixi248 – 253Combined sources6
Helixi254 – 256Combined sources3
Beta strandi258 – 268Combined sources11
Helixi278 – 281Combined sources4
Turni282 – 284Combined sources3
Beta strandi286 – 290Combined sources5
Helixi297 – 305Combined sources9
Helixi312 – 314Combined sources3
Beta strandi315 – 320Combined sources6
Helixi321 – 323Combined sources3
Helixi324 – 333Combined sources10
Helixi335 – 337Combined sources3
Beta strandi339 – 344Combined sources6

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
PDB entryMethodResolution (Å)ChainPositionsPDBsum
5VM2X-ray1.98A/B1-347[»]
ProteinModelPortaliP77280
SMRiP77280
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4105CPQ Bacteria
COG1063 LUCA
HOGENOMiHOG000294670
InParanoidiP77280
OMAiVQFAGVY
PhylomeDBiP77280

Family and domain databases

InterProiView protein in InterPro
IPR013149 ADH_C
IPR013154 ADH_N
IPR002328 ADH_Zn_CS
IPR011032 GroES-like_sf
IPR036291 NAD(P)-bd_dom_sf
IPR020843 PKS_ER
PfamiView protein in Pfam
PF08240 ADH_N, 1 hit
PF00107 ADH_zinc_N, 1 hit
SMARTiView protein in SMART
SM00829 PKS_ER, 1 hit
SUPFAMiSSF50129 SSF50129, 1 hit
SSF51735 SSF51735, 1 hit
PROSITEiView protein in PROSITE
PS00059 ADH_ZINC, 1 hit

Sequencei

Sequence statusi: Complete.

P77280-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKNSKAILQV PGTMKIISAE IPVPKEDEVL IKVEYVGICG SDVHGFESGP
60 70 80 90 100
FIPPKDPNQE IGLGHECAGT VVAVGSRVRK FKPGDRVNIE PGVPCGHCRY
110 120 130 140 150
CLEGKYNICP DVDFMATQPN YRGALTHYLC HPESFTYKLP DNMDTMEGAL
160 170 180 190 200
VEPAAVGMHA AMLADVKPGK KIIILGAGCI GLMTLQACKC LGATEIAVVD
210 220 230 240 250
VLEKRLAMAE QLGATVVING AKEDTIARCQ QFTEDMGADI VFETAGSAVT
260 270 280 290 300
VKQAPYLVMR GGKIMIVGTV PGDSAINFLK INREVTIQTV FRYANRYPVT
310 320 330 340
IEAISSGRFD VKSMVTHIYD YRDVQQAFEE SVNNKRDIIK GVIKISD
Length:347
Mass (Da):37,701
Last modified:February 1, 1997 - v1
Checksum:iF8E2172184626A3B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC74844.1
AP009048 Genomic DNA Translation: BAA15572.1
PIRiF64937
RefSeqiNP_416288.1, NC_000913.3
WP_000798110.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74844; AAC74844; b1774
BAA15572; BAA15572; BAA15572
GeneIDi946292
KEGGiecj:JW1763
eco:b1774
PATRICifig|1411691.4.peg.480

Similar proteinsi

Entry informationi

Entry nameiYDJJ_ECOLI
AccessioniPrimary (citable) accession number: P77280
Secondary accession number(s): P78174
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: March 28, 2018
This is version 128 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

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