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Protein

ABC transporter periplasmic-binding protein YphF

Gene

yphF

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Probably part of the binding-protein-dependent transport system YphDEF.

GO - Biological processi

Keywordsi

Biological processTransport

Enzyme and pathway databases

BioCyciEcoCyc:G7342-MONOMER.

Protein family/group databases

TCDBi3.A.1.2.27. the atp-binding cassette (abc) superfamily.

Names & Taxonomyi

Protein namesi
Recommended name:
ABC transporter periplasmic-binding protein YphF
Gene namesi
Name:yphF
Ordered Locus Names:b2548, JW2532
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13467. yphF.

Subcellular locationi

GO - Cellular componenti

Keywords - Cellular componenti

Periplasm

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 261 PublicationAdd BLAST26
ChainiPRO_000003174427 – 327ABC transporter periplasmic-binding protein YphFAdd BLAST301

Proteomic databases

PaxDbiP77269.
PRIDEiP77269.

Interactioni

Protein-protein interaction databases

BioGridi4261316. 32 interactors.
IntActiP77269. 3 interactors.
STRINGi316385.ECDH10B_2715.

Structurei

3D structure databases

ProteinModelPortaliP77269.
SMRiP77269.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4105FCA. Bacteria.
COG1879. LUCA.
HOGENOMiHOG000078217.
KOiK02058.
PhylomeDBiP77269.

Family and domain databases

InterProiView protein in InterPro
IPR028082. Peripla_BP_I.
IPR025997. SBP_2_dom.
PfamiView protein in Pfam
PF13407. Peripla_BP_4. 1 hit.
SUPFAMiSSF53822. SSF53822. 1 hit.

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P77269-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MPTKMRTTRN LLLMATLLGS ALFARAAEKE MTIGAIYLDT QGYYAGVRQG
60 70 80 90 100
VQDAAKDSSV QVQLIETNAQ GDISKESTFV DTLVARNVDA IILSAVSENG
110 120 130 140 150
SSRTVRRASE AGIPVICYNT CINQKGVDKY VSAYLVGDPL EFGKKLGNAA
160 170 180 190 200
ADYFIANKID QPKIAVINCE AFEVCVQRRK GFEEVLKSRV PGAQIVANQE
210 220 230 240 250
GTVLDKAISV GEKLIISTPD LNAIMGESGG ATLGAVKAVR NQNQAGKIAV
260 270 280 290 300
FGSDMTTEIA QELENNQVLK AVVDISGKKM GNAVFAQTLK VINKQADGEK
310 320
VIQVPIDLYT KTEDGKQWLA THVDGLP
Length:327
Mass (Da):35,058
Last modified:February 1, 1997 - v1
Checksum:i3182BC4494FFC766
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75601.1.
AP009048 Genomic DNA. Translation: BAA16457.1.
PIRiC65032.
RefSeqiNP_417043.1. NC_000913.3.
WP_001142427.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75601; AAC75601; b2548.
BAA16457; BAA16457; BAA16457.
GeneIDi947020.
KEGGiecj:JW2532.
eco:b2548.
PATRICifig|1411691.4.peg.4186.

Similar proteinsi

Entry informationi

Entry nameiYPHF_ECOLI
AccessioniPrimary (citable) accession number: P77269
Secondary accession number(s): P76994
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: July 5, 2017
This is version 116 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families