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Protein

Uncharacterized oxidoreductase YdfI

Gene

ydfI

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein inferred from homologyi

Functioni

Regions

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Nucleotide bindingi24 – 3512NADBy similarityAdd
BLAST

GO - Molecular functioni

GO - Biological processi

Complete GO annotation...

Keywords - Molecular functioni

Oxidoreductase

Keywords - Ligandi

NAD

Enzyme and pathway databases

BioCyciEcoCyc:G6816-MONOMER.
ECOL316407:JW1535-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized oxidoreductase YdfI (EC:1.-.-.-)
Gene namesi
Name:ydfI
Ordered Locus Names:b1542, JW1535
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13821. ydfI.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 486486Uncharacterized oxidoreductase YdfIPRO_0000170748Add
BLAST

Proteomic databases

PaxDbiP77260.
PRIDEiP77260.

Interactioni

Protein-protein interaction databases

BioGridi4260873. 7 interactions.
IntActiP77260. 4 interactions.
STRINGi511145.b1542.

Structurei

3D structure databases

ProteinModelPortaliP77260.
SMRiP77260. Positions 4-486.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Phylogenomic databases

eggNOGiENOG4105DEI. Bacteria.
COG0246. LUCA.
HOGENOMiHOG000202982.
InParanoidiP77260.
OMAiPQWEKAG.
PhylomeDBiP77260.

Family and domain databases

Gene3Di1.10.1040.10. 1 hit.
3.40.50.720. 1 hit.
InterProiIPR008927. 6-PGluconate_DH_C-like.
IPR013328. 6PGD_dom_2.
IPR000669. Mannitol_DH.
IPR013118. Mannitol_DH_C.
IPR023027. Mannitol_DH_CS.
IPR013131. Mannitol_DH_N.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PfamiPF01232. Mannitol_dh. 1 hit.
PF08125. Mannitol_dh_C. 1 hit.
[Graphical view]
PRINTSiPR00084. MTLDHDRGNASE.
SUPFAMiSSF48179. SSF48179. 1 hit.
SSF51735. SSF51735. 1 hit.
PROSITEiPS00974. MANNITOL_DHGENASE. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P77260-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGNNLLSAKA TLPVYDLNNL APRIVHLGFG AFHRAHQGVY ADILATEHFS
60 70 80 90 100
DWGYYEVNLI GGEQQIADLQ QQDNLYTVAE MSADVWTARV VGVVKKALHV
110 120 130 140 150
QIDGLETVLA AMCEPQIAIV SLTITEKGYF HSPATGQLML DHPMVAADVQ
160 170 180 190 200
NPHQPKTATG VIVEALARRK AAGLPAFTVM SCDNMPENGH VMRDVVTSYA
210 220 230 240 250
QAVDVKLAQW IEDNVTFPST MVDRIVPAVT EDTLAKIEQL TGVRDPAGVA
260 270 280 290 300
CEPFRQWVIE DNFVAGRPEW EKAGAELVSD VLPYEEMKLR MLNGSHSFLA
310 320 330 340 350
YLGYLAGYQH INDCMEDEHY RYAAYGLMLQ EQAPTLKVQG VDLQDYANRL
360 370 380 390 400
IARYSNPALR HRTWQIAMDG SQKLPQRMLD SVRWHLAHDS KFDLLALGVA
410 420 430 440 450
GWMRYVGGVD EQGNPIEISD PLLPVIQKAV QSSAEGKARV QSLLAIKAIF
460 470 480
GDDLPDNSLF TARVTETYLS LLAHGAKATV AKYSVK
Length:486
Mass (Da):53,685
Last modified:February 1, 1997 - v1
Checksum:i96F3BF07AE114B70
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74615.1.
AP009048 Genomic DNA. Translation: BAA15243.1.
PIRiA64909.
RefSeqiNP_416060.1. NC_000913.3.
WP_000527743.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74615; AAC74615; b1542.
BAA15243; BAA15243; BAA15243.
GeneIDi945861.
KEGGiecj:JW1535.
eco:b1542.
PATRICi32118384. VBIEscCol129921_1612.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74615.1.
AP009048 Genomic DNA. Translation: BAA15243.1.
PIRiA64909.
RefSeqiNP_416060.1. NC_000913.3.
WP_000527743.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP77260.
SMRiP77260. Positions 4-486.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260873. 7 interactions.
IntActiP77260. 4 interactions.
STRINGi511145.b1542.

Proteomic databases

PaxDbiP77260.
PRIDEiP77260.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74615; AAC74615; b1542.
BAA15243; BAA15243; BAA15243.
GeneIDi945861.
KEGGiecj:JW1535.
eco:b1542.
PATRICi32118384. VBIEscCol129921_1612.

Organism-specific databases

EchoBASEiEB3582.
EcoGeneiEG13821. ydfI.

Phylogenomic databases

eggNOGiENOG4105DEI. Bacteria.
COG0246. LUCA.
HOGENOMiHOG000202982.
InParanoidiP77260.
OMAiPQWEKAG.
PhylomeDBiP77260.

Enzyme and pathway databases

BioCyciEcoCyc:G6816-MONOMER.
ECOL316407:JW1535-MONOMER.

Miscellaneous databases

PROiP77260.

Family and domain databases

Gene3Di1.10.1040.10. 1 hit.
3.40.50.720. 1 hit.
InterProiIPR008927. 6-PGluconate_DH_C-like.
IPR013328. 6PGD_dom_2.
IPR000669. Mannitol_DH.
IPR013118. Mannitol_DH_C.
IPR023027. Mannitol_DH_CS.
IPR013131. Mannitol_DH_N.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
PfamiPF01232. Mannitol_dh. 1 hit.
PF08125. Mannitol_dh_C. 1 hit.
[Graphical view]
PRINTSiPR00084. MTLDHDRGNASE.
SUPFAMiSSF48179. SSF48179. 1 hit.
SSF51735. SSF51735. 1 hit.
PROSITEiPS00974. MANNITOL_DHGENASE. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYDFI_ECOLI
AccessioniPrimary (citable) accession number: P77260
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: September 7, 2016
This is version 112 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.