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Protein

Lysis protein S homolog from lambdoid prophage Qin

Gene

essQ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein inferred from homologyi

Functioni

GO - Biological processi

Complete GO annotation...

Keywords - Biological processi

Cytolysis, Host cell lysis by virus, Virus exit from host cell

Enzyme and pathway databases

BioCyciEcoCyc:G6829-MONOMER.
ECOL316407:JW5255-MONOMER.

Protein family/group databases

TCDBi1.E.1.1.2. the p21 holin s (p21 holin) family.

Names & Taxonomyi

Protein namesi
Recommended name:
Lysis protein S homolog from lambdoid prophage Qin
Gene namesi
Name:essQ
Synonyms:ydfS
Ordered Locus Names:b1556, JW5255
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13831. essQ.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7171Lysis protein S homolog from lambdoid prophage QinPRO_0000077657Add
BLAST

Proteomic databases

PaxDbiP77237.
PRIDEiP77237.

Interactioni

Protein-protein interaction databases

BioGridi4262936. 9 interactions.
STRINGi511145.b1556.

Structurei

3D structure databases

ProteinModelPortaliP77237.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the lambda phage S protein family.Curated

Phylogenomic databases

eggNOGiENOG4105QFS. Bacteria.
ENOG4111XDG. LUCA.
HOGENOMiHOG000120019.
OMAiPGQWSAI.
OrthoDBiEOG6K6VDJ.

Family and domain databases

InterProiIPR007054. Lysis_S.
[Graphical view]
PfamiPF04971. Phage_holin_2_1. 1 hit.
[Graphical view]
PIRSFiPIRSF030786. Lysis_S. 1 hit.

Sequencei

Sequence statusi: Complete.

P77237-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKSMDKLTTG VAYGTSAGNA GFWALQLLDK VTPSQWAAIG VLGSLVFGLL
60 70
TYLTNLYFKI KEDRRKAARG E
Length:71
Mass (Da):7,741
Last modified:April 27, 2001 - v2
Checksum:i6C1630125160C32B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74629.2.
AP009048 Genomic DNA. Translation: BAA15255.2.
PIRiG64910.
RefSeqiNP_416074.4. NC_000913.3.
WP_000839590.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74629; AAC74629; b1556.
BAA15255; BAA15255; BAA15255.
GeneIDi946093.
KEGGiecj:JW5255.
eco:b1556.
PATRICi32118414. VBIEscCol129921_1627.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC74629.2.
AP009048 Genomic DNA. Translation: BAA15255.2.
PIRiG64910.
RefSeqiNP_416074.4. NC_000913.3.
WP_000839590.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP77237.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262936. 9 interactions.
STRINGi511145.b1556.

Protein family/group databases

TCDBi1.E.1.1.2. the p21 holin s (p21 holin) family.

Proteomic databases

PaxDbiP77237.
PRIDEiP77237.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74629; AAC74629; b1556.
BAA15255; BAA15255; BAA15255.
GeneIDi946093.
KEGGiecj:JW5255.
eco:b1556.
PATRICi32118414. VBIEscCol129921_1627.

Organism-specific databases

EchoBASEiEB3592.
EcoGeneiEG13831. essQ.

Phylogenomic databases

eggNOGiENOG4105QFS. Bacteria.
ENOG4111XDG. LUCA.
HOGENOMiHOG000120019.
OMAiPGQWSAI.
OrthoDBiEOG6K6VDJ.

Enzyme and pathway databases

BioCyciEcoCyc:G6829-MONOMER.
ECOL316407:JW5255-MONOMER.

Miscellaneous databases

PROiP77237.

Family and domain databases

InterProiIPR007054. Lysis_S.
[Graphical view]
PfamiPF04971. Phage_holin_2_1. 1 hit.
[Graphical view]
PIRSFiPIRSF030786. Lysis_S. 1 hit.
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiESSQ_ECOLI
AccessioniPrimary (citable) accession number: P77237
Entry historyi
Integrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: April 27, 2001
Last modified: January 20, 2016
This is version 97 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.