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Protein

Sel1-repeat-containing protein YbeQ

Gene

ybeQ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

GO - Biological processi

  • response to oxidative stress Source: EcoCyc

Enzyme and pathway databases

BioCyciEcoCyc:G6351-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Sel1-repeat-containing protein YbeQ
Gene namesi
Name:ybeQ
Ordered Locus Names:b0644, JW5091
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13647. ybeQ.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001686811 – 325Sel1-repeat-containing protein YbeQAdd BLAST325

Proteomic databases

PaxDbiP77234.
PRIDEiP77234.

Interactioni

Protein-protein interaction databases

BioGridi4261862. 12 interactors.
IntActiP77234. 6 interactors.
STRINGi316385.ECDH10B_0713.

Structurei

3D structure databases

ProteinModelPortaliP77234.
SMRiP77234.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Repeati26 – 61Sel1-like 1CuratedAdd BLAST36
Repeati63 – 97Sel1-like 2CuratedAdd BLAST35
Repeati103 – 130Sel1-like 3CuratedAdd BLAST28
Repeati132 – 167Sel1-like 4CuratedAdd BLAST36
Repeati168 – 203Sel1-like 5CuratedAdd BLAST36
Repeati205 – 239Sel1-like 6CuratedAdd BLAST35
Repeati242 – 275Sel1-like 7CuratedAdd BLAST34
Repeati280 – 305Sel1-like 8CuratedAdd BLAST26

Sequence similaritiesi

To E.coli YbeT.Curated

Keywords - Domaini

Repeat

Phylogenomic databases

eggNOGiENOG4105EUU. Bacteria.
COG0790. LUCA.
HOGENOMiHOG000003584.
InParanoidiP77234.
KOiK07126.
PhylomeDBiP77234.

Family and domain databases

InterProiView protein in InterPro
IPR006597. Sel1-like.
PfamiView protein in Pfam
PF08238. Sel1. 8 hits.
SMARTiView protein in SMART
SM00671. SEL1. 8 hits.

Sequencei

Sequence statusi: Complete.

P77234-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MIFTSSCCDN LSIDEIIERA EKGDCEAQYI VGFYYNRDSA IDSPDDEKAF
60 70 80 90 100
YWLKLAAEQG HCEAQYSLGQ KYTEDKSRHK DNEQAIFWLK KAALQGHTFA
110 120 130 140 150
SNALGWTLDR GEAPNYKEAV VWYQIAAESG MSYAQNNLGW MYRNGNGVAK
160 170 180 190 200
DYALAFFWYK QAALQGHSDA QNNLADLYED GKGVAQNKTL AAFWYLKSAQ
210 220 230 240 250
QGNRHAQFQI AWDYNAGEGV DQDYKQAMYW YLKAAAQGSV GAYVNIGYMY
260 270 280 290 300
KHGQGVEKDY QAAFEWFTKA AECNDATAWY NLAIMYHYGE GRPVDLRQAL
310 320
DLYRKVQSSG TRDVSQEIRE TEDLL
Length:325
Mass (Da):37,031
Last modified:September 26, 2001 - v2
Checksum:i825BEB1884B2B92E
GO

Sequence cautioni

The sequence AAB40845 differs from that shown. Reason: Erroneous initiation. Translation N-terminally shortened.Curated

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U82598 Genomic DNA. Translation: AAB40845.1. Different initiation.
U00096 Genomic DNA. Translation: AAC73745.2.
AP009048 Genomic DNA. Translation: BAA35291.2.
PIRiB64799.
RefSeqiNP_415177.4. NC_000913.3.
WP_000578178.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73745; AAC73745; b0644.
BAA35291; BAA35291; BAA35291.
GeneIDi945251.
KEGGiecj:JW5091.
eco:b0644.
PATRICifig|511145.12.peg.675.

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.

Entry informationi

Entry nameiYBEQ_ECOLI
AccessioniPrimary (citable) accession number: P77234
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: September 26, 2001
Last modified: July 5, 2017
This is version 111 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene