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Protein

Putative inner membrane metabolite transport protein YdfJ

Gene

ydfJ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein uncertaini

Functioni

Caution

Could be the product of a pseudogene.Curated

GO - Molecular functioni

Keywordsi

Biological processSymport, Transport

Enzyme and pathway databases

BioCyciEcoCyc:B1543-MONOMER

Protein family/group databases

TCDBi2.A.1.6.9 the major facilitator superfamily (mfs)

Names & Taxonomyi

Protein namesi
Recommended name:
Putative inner membrane metabolite transport protein YdfJ
Gene namesi
Name:ydfJ
Ordered Locus Names:b4600, JW1536
ORF Names:b1543
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13822 ydfJ

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 7CytoplasmicSequence analysis7
Transmembranei8 – 28Helical; Name=1Sequence analysisAdd BLAST21
Transmembranei29 – 49Helical; Name=2Sequence analysisAdd BLAST21
Topological domaini50 – 74CytoplasmicSequence analysisAdd BLAST25
Transmembranei75 – 95Helical; Name=3Sequence analysisAdd BLAST21
Topological domaini96 – 97PeriplasmicSequence analysis2
Transmembranei98 – 118Helical; Name=4Sequence analysisAdd BLAST21
Topological domaini119 – 132CytoplasmicSequence analysisAdd BLAST14
Transmembranei133 – 153Helical; Name=5Sequence analysisAdd BLAST21
Topological domaini154 – 157PeriplasmicSequence analysis4
Transmembranei158 – 178Helical; Name=6Sequence analysisAdd BLAST21
Topological domaini179 – 225CytoplasmicSequence analysisAdd BLAST47
Transmembranei226 – 246Helical; Name=7Sequence analysisAdd BLAST21
Topological domaini247 – 251PeriplasmicSequence analysis5
Transmembranei252 – 272Helical; Name=8Sequence analysisAdd BLAST21
Topological domaini273 – 279CytoplasmicSequence analysis7
Transmembranei280 – 300Helical; Name=9Sequence analysisAdd BLAST21
Topological domaini301 – 307PeriplasmicSequence analysis7
Transmembranei308 – 328Helical; Name=10Sequence analysisAdd BLAST21
Topological domaini329 – 351CytoplasmicSequence analysisAdd BLAST23
Transmembranei352 – 372Helical; Name=11Sequence analysisAdd BLAST21
Topological domaini373PeriplasmicSequence analysis1
Transmembranei374 – 394Helical; Name=12Sequence analysisAdd BLAST21
Topological domaini395 – 427CytoplasmicSequence analysis1 PublicationAdd BLAST33

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000504821 – 427Putative inner membrane metabolite transport protein YdfJAdd BLAST427

Interactioni

Protein-protein interaction databases

BioGridi4260215, 134 interactors
DIPiDIP-11699N
IntActiP77228, 1 interactor

Structurei

3D structure databases

ProteinModelPortaliP77228
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000141613
InParanoidiP77228
KOiK08173
OMAiEMFGSRN
PhylomeDBiP77228

Family and domain databases

CDDicd06174 MFS, 1 hit
InterProiView protein in InterPro
IPR011701 MFS
IPR020846 MFS_dom
IPR005828 MFS_sugar_transport-like
IPR036259 MFS_trans_sf
IPR004736 MHS_symport
PfamiView protein in Pfam
PF07690 MFS_1, 1 hit
PF00083 Sugar_tr, 1 hit
SUPFAMiSSF103473 SSF103473, 1 hit
TIGRFAMsiTIGR00883 2A0106, 1 hit
PROSITEiView protein in PROSITE
PS50850 MFS, 1 hit

Sequencei

Sequence statusi: Complete.

P77228-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MDFQLYSLGA ALVFHEIFFP ESSTAMALIL AMGTYGAGYV ARIVGAFIFG
60 70 80 90 100
KMGDRIGRKK VLFITITMMG ICTTLIGVLP TYAQIGVFAP ILLVTLRIIQ
110 120 130 140 150
GLGAGAEISG AGTMLAEYAP KGKRGIISSF VAMGTNCGTL SATAIWAFMF
160 170 180 190 200
FILSKEELLA WGWRIPFLAS VVVMVFAIWL RMNLKESPVF EKVNDSNQPT
210 220 230 240 250
AKPAPAGSMF QSKSFWLATG LRFGQAGNSG LIQTFLAGYL VQTLLFNKAI
260 270 280 290 300
PTDALMISSI LGFMTIPFLG WLSDKIGRRI PYIIMNTSAI VLAWPMLSII
310 320 330 340 350
VDKSYAPSTI MVALIVIHNC AVLGLFALEN ITMAEMFGCK NRFTRMAISK
360 370 380 390 400
EIGGLIASGF GPILAGIFCT MTESWYPIAI MIMAYSVIGL ISALKMPEVK
410 420
DRDLSALEDA AEDQPRVVRA AQPSRSL
Length:427
Mass (Da):46,267
Last modified:February 1, 1997 - v1
Checksum:iA15C00B8E2DCBD9B
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA No translation available.
AP009048 Genomic DNA Translation: BAA15248.1
PIRiB64909
RefSeqiWP_000347482.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiBAA15248; BAA15248; BAA15248
KEGGiecj:JW1536
PATRICifig|83333.103.peg.2375

Similar proteinsi

Entry informationi

Entry nameiYDFJ_ECOLI
AccessioniPrimary (citable) accession number: P77228
Secondary accession number(s): P76884
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: March 28, 2018
This is version 136 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health