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Protein

Putative protein LomR

Gene

lomR

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein uncertaini

Functioni

Miscellaneous

This protein is encoded on Rac prophage.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative protein LomR
Gene namesi
Name:lomR
Ordered Locus Names:b4570, JW5884/JW5904
ORF Names:b1369/b1371
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14315. lomR.

Subcellular locationi

GO - Cellular componenti

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00002702071 – 51Putative protein LomRAdd BLAST51

Interactioni

Protein-protein interaction databases

DIPiDIP-48047N.

Structurei

3D structure databases

ProteinModelPortaliP77184.
SMRiP77184.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

Belongs to the Ail/OmpX/PagC/Lom family.Curated

Family and domain databases

Gene3Di2.40.160.20. 2 hits.
InterProiView protein in InterPro
IPR000758. Enterovir_OMP.
IPR011250. OMP/PagP_b-brl.
PfamiView protein in Pfam
PF06316. Ail_Lom. 2 hits.
PRINTSiPR00316. ENTEROVIROMP.
SUPFAMiSSF56925. SSF56925. 2 hits.

Sequencei

Sequence statusi: Complete.

P77184-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MRNRWFSVMV GPSVRVNEWF SAYAMAGMAY SRVSTFSGDY LRVTDNKGRC

E
Length:51
Mass (Da):5,888
Last modified:September 27, 2017 - v4
Checksum:i779B3337149C8911
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. No translation available.
PIRiT09188.

Similar proteinsi

Entry informationi

Entry nameiLOMR_ECOLI
AccessioniPrimary (citable) accession number: P77184
Entry historyiIntegrated into UniProtKB/Swiss-Prot: January 9, 2007
Last sequence update: September 27, 2017
Last modified: September 27, 2017
This is version 73 of the entry and version 4 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene, it is missing the C-terminus compared to orthologs. The sequence is interrupted by an IS5Y insertion sequence which causes the frameshift and loss of C-terminus.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. SIMILARITY comments
    Index of protein domains and families