Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Uncharacterized protein YkgH

Gene

ykgH

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Protein predictedi

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6180-MONOMER.
ECOL316407:JW0302-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YkgH
Gene namesi
Name:ykgH
Ordered Locus Names:b0310, JW0302
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13585. ykgH.

Subcellular locationi

Topology

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Transmembranei22 – 4221HelicalSequence analysisAdd
BLAST
Transmembranei189 – 20921HelicalSequence analysisAdd
BLAST

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 222222Uncharacterized protein YkgHPRO_0000168571Add
BLAST

Proteomic databases

PaxDbiP77180.

Interactioni

Protein-protein interaction databases

BioGridi4261528. 9 interactions.
STRINGi511145.b0310.

Structurei

3D structure databases

ProteinModelPortaliP77180.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

HOGENOMiHOG000117279.
OMAiRVHASII.

Sequencei

Sequence statusi: Complete.

P77180-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MREQIKQDID LIEILFYLKK KIRVILFIMA ICMAMVLLFL YINKDNIKVI
60 70 80 90 100
YSLKINQTTP GILVSCDSNN NFACQTTMTE DVIQRITTFF HTSPDVKNRE
110 120 130 140 150
IRLEWSGDKR ALPTAEEEIS RVQASIIKWY ASEYHNGRQV LDEIQTPSAI
160 170 180 190 200
NSELYTKMIY LTRNWSLYPN GDGCVTISSP EIKNKYPAAI CLALGFFLSI
210 220
VISVMFCLVK KMVDEYQQNS GQ
Length:222
Mass (Da):25,589
Last modified:February 1, 1997 - v1
Checksum:i3966AA25B8078FE5
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U73857 Genomic DNA. Translation: AAB18036.1.
U00096 Genomic DNA. Translation: AAC73413.1.
AP009048 Genomic DNA. Translation: BAE76093.1.
PIRiF64757.
RefSeqiNP_414844.1. NC_000913.3.
WP_001209100.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC73413; AAC73413; b0310.
BAE76093; BAE76093; BAE76093.
GeneIDi947513.
KEGGiecj:JW0302.
eco:b0310.
PATRICi32115749. VBIEscCol129921_0317.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U73857 Genomic DNA. Translation: AAB18036.1.
U00096 Genomic DNA. Translation: AAC73413.1.
AP009048 Genomic DNA. Translation: BAE76093.1.
PIRiF64757.
RefSeqiNP_414844.1. NC_000913.3.
WP_001209100.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP77180.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4261528. 9 interactions.
STRINGi511145.b0310.

Proteomic databases

PaxDbiP77180.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC73413; AAC73413; b0310.
BAE76093; BAE76093; BAE76093.
GeneIDi947513.
KEGGiecj:JW0302.
eco:b0310.
PATRICi32115749. VBIEscCol129921_0317.

Organism-specific databases

EchoBASEiEB3355.
EcoGeneiEG13585. ykgH.

Phylogenomic databases

HOGENOMiHOG000117279.
OMAiRVHASII.

Enzyme and pathway databases

BioCyciEcoCyc:G6180-MONOMER.
ECOL316407:JW0302-MONOMER.

Miscellaneous databases

PROiP77180.

Family and domain databases

ProtoNetiSearch...

Entry informationi

Entry nameiYKGH_ECOLI
AccessioniPrimary (citable) accession number: P77180
Secondary accession number(s): Q2MCB3
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: September 7, 2016
This is version 99 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.