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Protein

Uncharacterized protein YbdM

Gene

ybdM

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G6330-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YbdM
Gene namesi
Name:ybdM
Ordered Locus Names:b0601, JW0594
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13532 ybdM

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001686711 – 209Uncharacterized protein YbdMAdd BLAST209

Proteomic databases

PaxDbiP77174
PRIDEiP77174

Interactioni

Binary interactionsi

WithEntry#Exp.IntActNotes
rnkP0AFW45EBI-1118992,EBI-553769

Protein-protein interaction databases

BioGridi4260902, 16 interactors
IntActiP77174, 32 interactors
STRINGi316385.ECDH10B_0670

Structurei

3D structure databases

ProteinModelPortaliP77174
SMRiP77174
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105GTN Bacteria
COG1475 LUCA
HOGENOMiHOG000005607
InParanoidiP77174
OMAiAEEYEIV
PhylomeDBiP77174

Family and domain databases

InterProiView protein in InterPro
IPR003115 ParB/Sulfiredoxin_dom
IPR036086 ParB/Sulfiredoxin_sf
PfamiView protein in Pfam
PF02195 ParBc, 1 hit
SMARTiView protein in SMART
SM00470 ParB, 1 hit
SUPFAMiSSF110849 SSF110849, 1 hit

Sequencei

Sequence statusi: Complete.

P77174-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MGDTMQQRLT QDLTQFLASL PEDDRIKAIN EIRMAIHQVS PFREEPVDCV
60 70 80 90 100
LWVKNSQLMP NDYNPNNVAP PEKKLLQKSI EIDGFTQPIV VTHTDKNAME
110 120 130 140 150
IVDGFHRHEI GKGSSSLKLR LKGYLPVTCL EGTRNQRIAA TIRHNRARGR
160 170 180 190 200
HQITAMSEIV RELSQLGWDD NKIGKELGMD SDEVLRLKQI NGLQELFADR

QYSRAWTVK
Length:209
Mass (Da):23,943
Last modified:February 1, 1997 - v1
Checksum:iE915C45E96127D43
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U82598 Genomic DNA Translation: AAB40802.1
U00096 Genomic DNA Translation: AAC73702.1
AP009048 Genomic DNA Translation: BAA35231.2
PIRiG64793
RefSeqiNP_415134.1, NC_000913.3
WP_000502945.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC73702; AAC73702; b0601
BAA35231; BAA35231; BAA35231
GeneIDi945206
KEGGiecj:JW0594
eco:b0601
PATRICifig|511145.12.peg.630

Similar proteinsi

Entry informationi

Entry nameiYBDM_ECOLI
AccessioniPrimary (citable) accession number: P77174
Entry historyiIntegrated into UniProtKB/Swiss-Prot: July 15, 1998
Last sequence update: February 1, 1997
Last modified: March 28, 2018
This is version 105 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

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