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Protein

Uncharacterized protein YdhS

Gene

ydhS

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein predictedi

Functioni

GO - Molecular functioni

Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G6896-MONOMER.
ECOL316407:JW1658-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YdhS
Gene namesi
Name:ydhS
Ordered Locus Names:b1668, JW1658
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13953. ydhS.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 534534Uncharacterized protein YdhSPRO_0000168978Add
BLAST

Proteomic databases

PaxDbiP77148.
PRIDEiP77148.

Interactioni

Protein-protein interaction databases

BioGridi4260262. 20 interactions.
IntActiP77148. 1 interaction.
STRINGi511145.b1668.

Structurei

3D structure databases

ProteinModelPortaliP77148.
SMRiP77148. Positions 3-38, 191-216.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4108KTU. Bacteria.
COG4529. LUCA.
HOGENOMiHOG000120919.
OMAiPTGIYTF.
OrthoDBiEOG6R5C37.

Family and domain databases

Gene3Di3.40.50.720. 2 hits.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 1 hit.

Sequencei

Sequence statusi: Complete.

P77148-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKKIAIVGAG PTGIYTLFSL LQQQTPLSIS IFEQADEAGV GMPYSDEENS
60 70 80 90 100
KMMLANIASI EIPPIYCTYL EWLQKQEDSH LQRYGVKKET LHDRQFLPRI
110 120 130 140 150
LLGEYFRDQF LRLVDQARQQ KFAVAVYESC QVTDLQITNA GVMLATNQDL
160 170 180 190 200
PSETFDLAVI ATGHVWPDEE EATRTYFPSP WSGLMEAKVD ACNVGIMGTS
210 220 230 240 250
LSGLDAAMAV AIQHGSFIED DKQHVVFHRD NASEKLNITL LSRTGILPEA
260 270 280 290 300
DFYCPIPYEP LHIVTDQALN AEIQKGEEGL LDRVFRLIVE EIKFADPDWS
310 320 330 340 350
QRIALESLNV DSFAQAWFAE RKQRDPFDWA EKNLQEVERN KREKHTVPWR
360 370 380 390 400
YVILRLHEAV QEIVPHLNEH DHKRFSKGLA RVFIDNYAAI PSESIRRLLA
410 420 430 440 450
LREAGIIHIL ALGEDYKMEI NESRTVLKTE DNSYSFDVFI DARGQRPLKV
460 470 480 490 500
KDIPFPGLRE QLQKTGDEIP DVGEDYTLQQ PEDIRGRVAF GALPWLMHDQ
510 520 530
PFVQGLTACA EIGEAMARAV VKPASRARRR LSFD
Length:534
Mass (Da):60,755
Last modified:February 1, 1997 - v1
Checksum:i934727A00EBCE889
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U68703 Genomic DNA. Translation: AAB47944.1.
U00096 Genomic DNA. Translation: AAC74738.1.
AP009048 Genomic DNA. Translation: BAE76496.1.
PIRiD64924.
RefSeqiNP_416183.1. NC_000913.3.
WP_000716950.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC74738; AAC74738; b1668.
BAE76496; BAE76496; BAE76496.
GeneIDi945786.
KEGGiecj:JW1658.
eco:b1668.
PATRICi32118642. VBIEscCol129921_1739.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U68703 Genomic DNA. Translation: AAB47944.1.
U00096 Genomic DNA. Translation: AAC74738.1.
AP009048 Genomic DNA. Translation: BAE76496.1.
PIRiD64924.
RefSeqiNP_416183.1. NC_000913.3.
WP_000716950.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP77148.
SMRiP77148. Positions 3-38, 191-216.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260262. 20 interactions.
IntActiP77148. 1 interaction.
STRINGi511145.b1668.

Proteomic databases

PaxDbiP77148.
PRIDEiP77148.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC74738; AAC74738; b1668.
BAE76496; BAE76496; BAE76496.
GeneIDi945786.
KEGGiecj:JW1658.
eco:b1668.
PATRICi32118642. VBIEscCol129921_1739.

Organism-specific databases

EchoBASEiEB3711.
EcoGeneiEG13953. ydhS.

Phylogenomic databases

eggNOGiENOG4108KTU. Bacteria.
COG4529. LUCA.
HOGENOMiHOG000120919.
OMAiPTGIYTF.
OrthoDBiEOG6R5C37.

Enzyme and pathway databases

BioCyciEcoCyc:G6896-MONOMER.
ECOL316407:JW1658-MONOMER.

Miscellaneous databases

PROiP77148.

Family and domain databases

Gene3Di3.40.50.720. 2 hits.
InterProiIPR023753. FAD/NAD-binding_dom.
IPR016040. NAD(P)-bd_dom.
[Graphical view]
SUPFAMiSSF51905. SSF51905. 1 hit.
ProtoNetiSearch...

Publicationsi

« Hide 'large scale' publications
  1. "Analysis of the boundaries of Salmonella pathogenicity island 2 and the corresponding chromosomal region of Escherichia coli K-12."
    Hensel M., Shea J.E., Baeumler A.J., Gleeson C., Blattner F.R., Holden D.W.
    J. Bacteriol. 179:1105-1111(1997) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  3. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYDHS_ECOLI
AccessioniPrimary (citable) accession number: P77148
Secondary accession number(s): Q2MB60
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: February 1, 1997
Last modified: January 20, 2016
This is version 95 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.