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Protein

Inner membrane protein YqcE

Gene

yqcE

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:B2775-MONOMER.
ECOL316407:JW2746-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YqcE
Gene namesi
Name:yqcE
Synonyms:yqcF
Ordered Locus Names:b2775, JW2746
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13174. yqcE.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 8CytoplasmicSequence analysis8
Transmembranei9 – 29HelicalSequence analysisAdd BLAST21
Topological domaini30 – 48PeriplasmicSequence analysisAdd BLAST19
Transmembranei49 – 69HelicalSequence analysisAdd BLAST21
Topological domaini70 – 75CytoplasmicSequence analysis6
Transmembranei76 – 96HelicalSequence analysisAdd BLAST21
Transmembranei97 – 117HelicalSequence analysisAdd BLAST21
Topological domaini118 – 138CytoplasmicSequence analysisAdd BLAST21
Transmembranei139 – 159HelicalSequence analysisAdd BLAST21
Topological domaini160 – 171PeriplasmicSequence analysisAdd BLAST12
Transmembranei172 – 192HelicalSequence analysisAdd BLAST21
Topological domaini193 – 219CytoplasmicSequence analysisAdd BLAST27
Transmembranei220 – 240HelicalSequence analysisAdd BLAST21
Topological domaini241 – 259PeriplasmicSequence analysisAdd BLAST19
Transmembranei260 – 280HelicalSequence analysisAdd BLAST21
Topological domaini281 – 291CytoplasmicSequence analysisAdd BLAST11
Transmembranei292 – 312HelicalSequence analysisAdd BLAST21
Topological domaini313PeriplasmicSequence analysis1
Transmembranei314 – 334HelicalSequence analysisAdd BLAST21
Topological domaini335 – 354CytoplasmicSequence analysisAdd BLAST20
Transmembranei355 – 375HelicalSequence analysisAdd BLAST21
Topological domaini376 – 388PeriplasmicSequence analysisAdd BLAST13
Transmembranei389 – 409HelicalSequence analysisAdd BLAST21
Topological domaini410 – 425CytoplasmicSequence analysisAdd BLAST16

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001693281 – 425Inner membrane protein YqcEAdd BLAST425

Proteomic databases

PaxDbiP77031.
PRIDEiP77031.

Interactioni

Protein-protein interaction databases

BioGridi4262293. 139 interactors.
DIPiDIP-12849N.
IntActiP77031. 1 interactor.
MINTiMINT-1248595.
STRINGi511145.b2775.

Structurei

3D structure databases

ProteinModelPortaliP77031.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To E.coli YihN.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4108ITV. Bacteria.
ENOG410Y8F9. LUCA.
HOGENOMiHOG000124124.
OMAiNIVPNLH.
PhylomeDBiP77031.

Family and domain databases

CDDicd06174. MFS. 1 hit.
InterProiIPR011701. MFS.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P77031-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQHNSYRRWI TLAIISFSGG VSFDLAYLRY IYQIPMAKFM GFSNTEIGLI
60 70 80 90 100
MSTFGIAAII LYAPSGVIAD KFSHRKMITS AMIITGLLGL LMATYPPLWV
110 120 130 140 150
MLCIQIAFAI TTILMLWSVS IKAASLLGDH SEQGKIMGWM EGLRGVGVMS
160 170 180 190 200
LAVFTMWVFS RFAPDDSTSL KTVIIIYSVV YILLGILCWF FVSDNNNLRS
210 220 230 240 250
ANNEEKQSFQ LSDILAVLRI STTWYCSMVI FGVFTIYAIL SYSTNYLTEM
260 270 280 290 300
YGMSLVAASY MGIVINKIFR ALCGPLGGII TTYSKVKSPT RVIQILSVLG
310 320 330 340 350
LLTLTALLVT NSNPQSVAMG IGLILLLGFT CYASRGLYWA CPGEARTPSY
360 370 380 390 400
IMGTTVGICS VIGFLPDVFV YPIIGHWQDT LPAAEAYRNM WLMGMAALGM
410 420
VIVFTFLLFQ KIRTADSAPA MASSK
Length:425
Mass (Da):46,831
Last modified:February 1, 1997 - v1
Checksum:i538C547C7FC52DEA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75817.1.
AP009048 Genomic DNA. Translation: BAA16570.1.
PIRiC65059.
RefSeqiNP_417255.1. NC_000913.3.
WP_001164544.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75817; AAC75817; b2775.
BAA16570; BAA16570; BAA16570.
GeneIDi947248.
KEGGiecj:JW2746.
eco:b2775.
PATRICi32120960. VBIEscCol129921_2872.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75817.1.
AP009048 Genomic DNA. Translation: BAA16570.1.
PIRiC65059.
RefSeqiNP_417255.1. NC_000913.3.
WP_001164544.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP77031.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262293. 139 interactors.
DIPiDIP-12849N.
IntActiP77031. 1 interactor.
MINTiMINT-1248595.
STRINGi511145.b2775.

Proteomic databases

PaxDbiP77031.
PRIDEiP77031.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75817; AAC75817; b2775.
BAA16570; BAA16570; BAA16570.
GeneIDi947248.
KEGGiecj:JW2746.
eco:b2775.
PATRICi32120960. VBIEscCol129921_2872.

Organism-specific databases

EchoBASEiEB2966.
EcoGeneiEG13174. yqcE.

Phylogenomic databases

eggNOGiENOG4108ITV. Bacteria.
ENOG410Y8F9. LUCA.
HOGENOMiHOG000124124.
OMAiNIVPNLH.
PhylomeDBiP77031.

Enzyme and pathway databases

BioCyciEcoCyc:B2775-MONOMER.
ECOL316407:JW2746-MONOMER.

Miscellaneous databases

PROiP77031.

Family and domain databases

CDDicd06174. MFS. 1 hit.
InterProiIPR011701. MFS.
IPR020846. MFS_dom.
[Graphical view]
PfamiPF07690. MFS_1. 1 hit.
[Graphical view]
SUPFAMiSSF103473. SSF103473. 1 hit.
PROSITEiPS50850. MFS. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYQCE_ECOLI
AccessioniPrimary (citable) accession number: P77031
Secondary accession number(s): P76634, P76635
Entry historyi
Integrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: November 2, 2016
This is version 121 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.