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Protein

Inner membrane protein YqcE

Gene

yqcE

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Experimental evidence at protein leveli

Functioni

GO - Biological processi

Enzyme and pathway databases

BioCyciEcoCyc:B2775-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YqcE
Gene namesi
Name:yqcE
Synonyms:yqcF
Ordered Locus Names:b2775, JW2746
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi

Organism-specific databases

EcoGeneiEG13174 yqcE

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 8CytoplasmicSequence analysis8
Transmembranei9 – 29HelicalSequence analysisAdd BLAST21
Topological domaini30 – 48PeriplasmicSequence analysisAdd BLAST19
Transmembranei49 – 69HelicalSequence analysisAdd BLAST21
Topological domaini70 – 75CytoplasmicSequence analysis6
Transmembranei76 – 96HelicalSequence analysisAdd BLAST21
Transmembranei97 – 117HelicalSequence analysisAdd BLAST21
Topological domaini118 – 138CytoplasmicSequence analysisAdd BLAST21
Transmembranei139 – 159HelicalSequence analysisAdd BLAST21
Topological domaini160 – 171PeriplasmicSequence analysisAdd BLAST12
Transmembranei172 – 192HelicalSequence analysisAdd BLAST21
Topological domaini193 – 219CytoplasmicSequence analysisAdd BLAST27
Transmembranei220 – 240HelicalSequence analysisAdd BLAST21
Topological domaini241 – 259PeriplasmicSequence analysisAdd BLAST19
Transmembranei260 – 280HelicalSequence analysisAdd BLAST21
Topological domaini281 – 291CytoplasmicSequence analysisAdd BLAST11
Transmembranei292 – 312HelicalSequence analysisAdd BLAST21
Topological domaini313PeriplasmicSequence analysis1
Transmembranei314 – 334HelicalSequence analysisAdd BLAST21
Topological domaini335 – 354CytoplasmicSequence analysisAdd BLAST20
Transmembranei355 – 375HelicalSequence analysisAdd BLAST21
Topological domaini376 – 388PeriplasmicSequence analysisAdd BLAST13
Transmembranei389 – 409HelicalSequence analysisAdd BLAST21
Topological domaini410 – 425CytoplasmicSequence analysisAdd BLAST16

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001693281 – 425Inner membrane protein YqcEAdd BLAST425

Proteomic databases

PaxDbiP77031
PRIDEiP77031

Interactioni

Protein-protein interaction databases

BioGridi4262293, 139 interactors
DIPiDIP-12849N
IntActiP77031, 1 interactor
STRINGi316385.ECDH10B_2942

Structurei

3D structure databases

ProteinModelPortaliP77031
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Sequence similaritiesi

To E.coli YihN.Curated

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4108ITV Bacteria
ENOG410Y8F9 LUCA
HOGENOMiHOG000124124
OMAiYQILMIV
PhylomeDBiP77031

Family and domain databases

CDDicd06174 MFS, 1 hit
InterProiView protein in InterPro
IPR011701 MFS
IPR020846 MFS_dom
IPR036259 MFS_trans_sf
PfamiView protein in Pfam
PF07690 MFS_1, 1 hit
SUPFAMiSSF103473 SSF103473, 1 hit
PROSITEiView protein in PROSITE
PS50850 MFS, 1 hit

Sequencei

Sequence statusi: Complete.

P77031-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MQHNSYRRWI TLAIISFSGG VSFDLAYLRY IYQIPMAKFM GFSNTEIGLI
60 70 80 90 100
MSTFGIAAII LYAPSGVIAD KFSHRKMITS AMIITGLLGL LMATYPPLWV
110 120 130 140 150
MLCIQIAFAI TTILMLWSVS IKAASLLGDH SEQGKIMGWM EGLRGVGVMS
160 170 180 190 200
LAVFTMWVFS RFAPDDSTSL KTVIIIYSVV YILLGILCWF FVSDNNNLRS
210 220 230 240 250
ANNEEKQSFQ LSDILAVLRI STTWYCSMVI FGVFTIYAIL SYSTNYLTEM
260 270 280 290 300
YGMSLVAASY MGIVINKIFR ALCGPLGGII TTYSKVKSPT RVIQILSVLG
310 320 330 340 350
LLTLTALLVT NSNPQSVAMG IGLILLLGFT CYASRGLYWA CPGEARTPSY
360 370 380 390 400
IMGTTVGICS VIGFLPDVFV YPIIGHWQDT LPAAEAYRNM WLMGMAALGM
410 420
VIVFTFLLFQ KIRTADSAPA MASSK
Length:425
Mass (Da):46,831
Last modified:February 1, 1997 - v1
Checksum:i538C547C7FC52DEA
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC75817.1
AP009048 Genomic DNA Translation: BAA16570.1
PIRiC65059
RefSeqiNP_417255.1, NC_000913.3
WP_001164544.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC75817; AAC75817; b2775
BAA16570; BAA16570; BAA16570
GeneIDi947248
KEGGiecj:JW2746
eco:b2775
PATRICifig|1411691.4.peg.3963

Similar proteinsi

Entry informationi

Entry nameiYQCE_ECOLI
AccessioniPrimary (citable) accession number: P77031
Secondary accession number(s): P76634, P76635
Entry historyiIntegrated into UniProtKB/Swiss-Prot: November 1, 1997
Last sequence update: February 1, 1997
Last modified: March 28, 2018
This is version 127 of the entry and version 1 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

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