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Protein

Uncharacterized ABC transporter ATP-binding protein YnjD

Gene

ynjD

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: -Protein inferred from homologyi

Functioni

Probably part of a binding-protein-dependent transport system YnjCD. Probably responsible for energy coupling to the transport system.

Regions

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Nucleotide bindingi34 – 41ATPPROSITE-ProRule annotation8

GO - Molecular functioni

Keywordsi

Biological processTransport
LigandATP-binding, Nucleotide-binding

Enzyme and pathway databases

BioCyciEcoCyc:YNJD-MONOMER

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized ABC transporter ATP-binding protein YnjD
Gene namesi
Name:ynjD
Ordered Locus Names:b1756, JW5286
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14006 ynjD

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00000931701 – 217Uncharacterized ABC transporter ATP-binding protein YnjDAdd BLAST217

Proteomic databases

PaxDbiP76909
PRIDEiP76909

Interactioni

Protein-protein interaction databases

BioGridi4262124, 122 interactors
STRINGi316385.ECDH10B_1894

Structurei

3D structure databases

ProteinModelPortaliP76909
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Domains and Repeats

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Domaini2 – 216ABC transporterPROSITE-ProRule annotationAdd BLAST215

Sequence similaritiesi

Belongs to the ABC transporter superfamily.Curated

Phylogenomic databases

eggNOGiENOG4108VGW Bacteria
COG4136 LUCA
InParanoidiP76909
KOiK05779
OMAiTHDEDDI
PhylomeDBiP76909

Family and domain databases

InterProiView protein in InterPro
IPR003593 AAA+_ATPase
IPR003439 ABC_transporter-like
IPR017871 ABC_transporter_CS
IPR027417 P-loop_NTPase
PfamiView protein in Pfam
PF00005 ABC_tran, 1 hit
SMARTiView protein in SMART
SM00382 AAA, 1 hit
SUPFAMiSSF52540 SSF52540, 1 hit
PROSITEiView protein in PROSITE
PS00211 ABC_TRANSPORTER_1, 1 hit
PS50893 ABC_TRANSPORTER_2, 1 hit

Sequencei

Sequence statusi: Complete.

P76909-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLCVKNVSLR LPESRLLTNV NFTVDKGDIV TLMGPSGCGK STLFSWMIGA
60 70 80 90 100
LAEQFSCTGE LWLNEQRIDI LPTAQRQIGI LFQDALLFDQ FSVGQNLLLA
110 120 130 140 150
LPATLKGNAR RNAVNDALER SGLEGAFHQD PATLSGGQRA RVALLRALLA
160 170 180 190 200
QPKALLLDEP FSRLDVALRD NFRQWVFSEV RALAIPVVQV THDLQDVPAD
210
SSVLDMAQWS ENYNKLR
Length:217
Mass (Da):24,017
Last modified:April 27, 2001 - v2
Checksum:i81A65D105D8779FF
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA Translation: AAC74826.1
AP009048 Genomic DNA Translation: BAA15547.2
PIRiD64935
RefSeqiNP_416270.1, NC_000913.3
WP_001300558.1, NZ_LN832404.1

Genome annotation databases

EnsemblBacteriaiAAC74826; AAC74826; b1756
BAA15547; BAA15547; BAA15547
GeneIDi944965
KEGGiecj:JW5286
eco:b1756
PATRICifig|1411691.4.peg.499

Similar proteinsi

Entry informationi

Entry nameiYNJD_ECOLI
AccessioniPrimary (citable) accession number: P76909
Secondary accession number(s): P76225
Entry historyiIntegrated into UniProtKB/Swiss-Prot: April 27, 2001
Last sequence update: April 27, 2001
Last modified: March 28, 2018
This is version 131 of the entry and version 2 of the sequence. See complete history.
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome
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Main funding by: National Institutes of Health