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Protein

Inner membrane protein YqiJ

Gene

yqiJ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

GO - Biological processi

  • cellular response to DNA damage stimulus Source: EcoliWiki
Complete GO annotation...

Enzyme and pathway databases

BioCyciEcoCyc:G7588-MONOMER.
ECOL316407:JW3022-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Inner membrane protein YqiJ
Gene namesi
Name:yqiJ
Ordered Locus Names:b3050, JW3022
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14231. yqiJ.

Subcellular locationi

Topology

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Topological domaini1 – 11PeriplasmicSequence analysisAdd BLAST11
Transmembranei12 – 32HelicalSequence analysisAdd BLAST21
Topological domaini33 – 65CytoplasmicSequence analysisAdd BLAST33
Transmembranei66 – 86HelicalSequence analysisAdd BLAST21
Topological domaini87 – 101PeriplasmicSequence analysisAdd BLAST15
Transmembranei102 – 122HelicalSequence analysisAdd BLAST21
Topological domaini123 – 209CytoplasmicSequence analysisAdd BLAST87

GO - Cellular componenti

  • integral component of membrane Source: UniProtKB-KW
  • plasma membrane Source: EcoCyc
Complete GO annotation...

Keywords - Cellular componenti

Cell inner membrane, Cell membrane, Membrane

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
ChainiPRO_00001694181 – 209Inner membrane protein YqiJAdd BLAST209

Proteomic databases

PaxDbiP76657.
PRIDEiP76657.

Interactioni

Protein-protein interaction databases

BioGridi4263342. 13 interactors.
STRINGi511145.b3050.

Structurei

3D structure databases

ProteinModelPortaliP76657.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Transmembrane, Transmembrane helix

Phylogenomic databases

eggNOGiENOG4105PV3. Bacteria.
ENOG4111XIY. LUCA.
HOGENOMiHOG000125093.
InParanoidiP76657.
OMAiHDETYAV.

Family and domain databases

InterProiIPR010840. DUF1449.
[Graphical view]
PfamiPF07290. DUF1449. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

P76657-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MILFADYNTP YLFAISFVLL IGLLEIFALI CGHMLSGALD AHLDHYDSIT
60 70 80 90 100
TGHISQALHY LNIGRLPALV VLCLLAGFFG LIGILLQHAC IMVWQSPLSN
110 120 130 140 150
LFVVPVSLLF TIIAVHYTGK IVAPWIPRDH SSAITEEEYI GSMALITGHQ
160 170 180 190 200
ATSGNPCEGK LTDQFGQIHY LLLEPEEGKI FTKGDKVLII CRLSATRYLA

ENNPWPQIL
Length:209
Mass (Da):23,087
Last modified:February 1, 1997 - v1
Checksum:i71FE854583598F0C
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC76086.1.
AP009048 Genomic DNA. Translation: BAE77102.1.
PIRiH65092.
RefSeqiNP_417522.1. NC_000913.3.
WP_000599926.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC76086; AAC76086; b3050.
BAE77102; BAE77102; BAE77102.
GeneIDi947530.
KEGGiecj:JW3022.
eco:b3050.
PATRICi32121512. VBIEscCol129921_3143.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC76086.1.
AP009048 Genomic DNA. Translation: BAE77102.1.
PIRiH65092.
RefSeqiNP_417522.1. NC_000913.3.
WP_000599926.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP76657.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4263342. 13 interactors.
STRINGi511145.b3050.

Proteomic databases

PaxDbiP76657.
PRIDEiP76657.

Protocols and materials databases

DNASUi947530.
Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC76086; AAC76086; b3050.
BAE77102; BAE77102; BAE77102.
GeneIDi947530.
KEGGiecj:JW3022.
eco:b3050.
PATRICi32121512. VBIEscCol129921_3143.

Organism-specific databases

EchoBASEiEB3982.
EcoGeneiEG14231. yqiJ.

Phylogenomic databases

eggNOGiENOG4105PV3. Bacteria.
ENOG4111XIY. LUCA.
HOGENOMiHOG000125093.
InParanoidiP76657.
OMAiHDETYAV.

Enzyme and pathway databases

BioCyciEcoCyc:G7588-MONOMER.
ECOL316407:JW3022-MONOMER.

Miscellaneous databases

PROiP76657.

Family and domain databases

InterProiIPR010840. DUF1449.
[Graphical view]
PfamiPF07290. DUF1449. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYQIJ_ECOLI
AccessioniPrimary (citable) accession number: P76657
Secondary accession number(s): Q2M9F4
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: February 1, 1997
Last modified: November 2, 2016
This is version 100 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.