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Protein

Putative uncharacterized protein YpjC

Gene

ypjC

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Protein uncertaini

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7385-MONOMER.
ECOL316407:JW5424-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Putative uncharacterized protein YpjC
Gene namesi
Name:ypjC
Ordered Locus Names:b2650, JW5424
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG13519. ypjC.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 160160Putative uncharacterized protein YpjCPRO_0000169287Add
BLAST

Proteomic databases

PRIDEiP76613.

Interactioni

Protein-protein interaction databases

BioGridi4262255. 129 interactions.

Structurei

3D structure databases

ProteinModelPortaliP76613.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Phylogenomic databases

HOGENOMiHOG000078298.
OMAiKNNEFNT.

Family and domain databases

InterProiIPR020227. Uncharacterised_YpjC.
[Graphical view]
ProDomiPD094182. Uncharacterised_YpjC. 1 hit.
[Graphical view] [Entries sharing at least one domain]

Sequencei

Sequence statusi: Complete.

P76613-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MLVSKSNGFN ASAVLGSGSY NENKSSKHME LLAHSILKLI CKEAASETYR
60 70 80 90 100
GALETLQKMM SECIYQEGNA FVIMGAGEQL KRIKYEVGEN NLKVFNVHFN
110 120 130 140 150
NNHELVSSGE PDVICLSKQV WENLLIKLKL ENNENVFSET KKLSNKNNAD
160
QFFECAKRNE
Length:160
Mass (Da):18,024
Last modified:February 1, 1997 - v1
Checksum:iFD2017CD2C5D06AD
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE76776.1.
PIRiD65044.
RefSeqiWP_000961356.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiBAE76776; BAE76776; BAE76776.
KEGGiecj:JW5424.
PATRICi48664710. VBIEscCol107702_2682.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. No translation available.
AP009048 Genomic DNA. Translation: BAE76776.1.
PIRiD65044.
RefSeqiWP_000961356.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP76613.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4262255. 129 interactions.

Proteomic databases

PRIDEiP76613.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiBAE76776; BAE76776; BAE76776.
KEGGiecj:JW5424.
PATRICi48664710. VBIEscCol107702_2682.

Organism-specific databases

EchoBASEiEB3292.
EcoGeneiEG13519. ypjC.

Phylogenomic databases

HOGENOMiHOG000078298.
OMAiKNNEFNT.

Enzyme and pathway databases

BioCyciEcoCyc:G7385-MONOMER.
ECOL316407:JW5424-MONOMER.

Family and domain databases

InterProiIPR020227. Uncharacterised_YpjC.
[Graphical view]
ProDomiPD094182. Uncharacterised_YpjC. 1 hit.
[Graphical view] [Entries sharing at least one domain]
ProtoNetiSearch...

Publicationsi

  1. Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / MG1655 / ATCC 47076.
  2. "Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110."
    Hayashi K., Morooka N., Yamamoto Y., Fujita K., Isono K., Choi S., Ohtsubo E., Baba T., Wanner B.L., Mori H., Horiuchi T.
    Mol. Syst. Biol. 2:E1-E5(2006) [PubMed] [Europe PMC] [Abstract]
    Cited for: NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
    Strain: K12 / W3110 / ATCC 27325 / DSM 5911.

Entry informationi

Entry nameiYPJC_ECOLI
AccessioniPrimary (citable) accession number: P76613
Secondary accession number(s): Q2MAD0
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: February 1, 1997
Last modified: April 13, 2016
This is version 80 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Caution

Could be the product of a pseudogene.Curated

Keywords - Technical termi

Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.