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Protein

Uncharacterized protein YfgJ

Gene

yfgJ

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 1 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7318-MONOMER.
ECOL316407:JW5402-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Uncharacterized protein YfgJ
Gene namesi
Name:yfgJ
Ordered Locus Names:b2510, JW5402
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacterialesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14206. yfgJ.

PTM / Processingi

Molecule processing

Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Chaini1 – 7171Uncharacterized protein YfgJPRO_0000169246Add
BLAST

Proteomic databases

PaxDbiP76575.

Interactioni

Protein-protein interaction databases

BioGridi4263150. 4 interactions.
STRINGi511145.b2510.

Structurei

Secondary structure

1
71
Legend: HelixTurnBeta strand
Show more details
Feature keyPosition(s)LengthDescriptionGraphical viewFeature identifierActions
Beta strandi6 – 83Combined sources
Beta strandi10 – 156Combined sources
Beta strandi18 – 214Combined sources
Turni22 – 243Combined sources
Beta strandi27 – 337Combined sources
Turni35 – 373Combined sources
Beta strandi42 – 465Combined sources
Beta strandi49 – 535Combined sources
Turni63 – 653Combined sources
Beta strandi66 – 705Combined sources

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2JNENMR-A1-71[»]
ProteinModelPortaliP76575.
SMRiP76575. Positions 1-71.
ModBaseiSearch...
MobiDBiSearch...

Miscellaneous databases

EvolutionaryTraceiP76575.

Family & Domainsi

Phylogenomic databases

eggNOGiENOG4105VPD. Bacteria.
ENOG41123NZ. LUCA.
HOGENOMiHOG000276155.
OMAiPECHKPL.

Family and domain databases

Gene3Di2.10.290.10. 1 hit.
InterProiIPR010807. DUF1407.
IPR029037. YfgJ-like.
[Graphical view]
PfamiPF07191. zinc-ribbons_6. 1 hit.
[Graphical view]
ProDomiPD060428. DUF1407. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF161187. SSF161187. 1 hit.

Sequencei

Sequence statusi: Complete.

P76575-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MELHCPQCQH VLDQDNGHAR CRSCGEFIEM KALCPDCHQP LQVLKACGAV
60 70
DYFCQHGHGL ISKKRVEFVL A
Length:71
Mass (Da):7,994
Last modified:December 4, 2007 - v2
Checksum:i55CC98A0F065BFB2
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75563.2.
AP009048 Genomic DNA. Translation: BAE76728.1.
PIRiE65027.
RefSeqiNP_417005.2. NC_000913.3.
WP_001301158.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75563; AAC75563; b2510.
BAE76728; BAE76728; BAE76728.
GeneIDi946984.
KEGGiecj:JW5402.
eco:b2510.
PATRICi32120413. VBIEscCol129921_2609.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75563.2.
AP009048 Genomic DNA. Translation: BAE76728.1.
PIRiE65027.
RefSeqiNP_417005.2. NC_000913.3.
WP_001301158.1. NZ_LN832404.1.

3D structure databases

Select the link destinations:
PDBei
RCSB PDBi
PDBji
Links Updated
EntryMethodResolution (Å)ChainPositionsPDBsum
2JNENMR-A1-71[»]
ProteinModelPortaliP76575.
SMRiP76575. Positions 1-71.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4263150. 4 interactions.
STRINGi511145.b2510.

Proteomic databases

PaxDbiP76575.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75563; AAC75563; b2510.
BAE76728; BAE76728; BAE76728.
GeneIDi946984.
KEGGiecj:JW5402.
eco:b2510.
PATRICi32120413. VBIEscCol129921_2609.

Organism-specific databases

EchoBASEiEB3958.
EcoGeneiEG14206. yfgJ.

Phylogenomic databases

eggNOGiENOG4105VPD. Bacteria.
ENOG41123NZ. LUCA.
HOGENOMiHOG000276155.
OMAiPECHKPL.

Enzyme and pathway databases

BioCyciEcoCyc:G7318-MONOMER.
ECOL316407:JW5402-MONOMER.

Miscellaneous databases

EvolutionaryTraceiP76575.
PROiP76575.

Family and domain databases

Gene3Di2.10.290.10. 1 hit.
InterProiIPR010807. DUF1407.
IPR029037. YfgJ-like.
[Graphical view]
PfamiPF07191. zinc-ribbons_6. 1 hit.
[Graphical view]
ProDomiPD060428. DUF1407. 1 hit.
[Graphical view] [Entries sharing at least one domain]
SUPFAMiSSF161187. SSF161187. 1 hit.
ProtoNetiSearch...

Entry informationi

Entry nameiYFGJ_ECOLI
AccessioniPrimary (citable) accession number: P76575
Secondary accession number(s): Q2MAH8
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 15, 1998
Last sequence update: December 4, 2007
Last modified: September 7, 2016
This is version 94 of the entry and version 2 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

3D-structure, Complete proteome, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene
  2. PDB cross-references
    Index of Protein Data Bank (PDB) cross-references

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.