Skip Header

You are using a version of browser that may not display all the features of this website. Please consider upgrading your browser.
Protein

Protein YfdX

Gene

yfdX

Organism
Escherichia coli (strain K12)
Status
Reviewed-Annotation score: Annotation score: 2 out of 5-Experimental evidence at protein leveli

Functioni

Enzyme and pathway databases

BioCyciEcoCyc:G7238-MONOMER.
ECOL316407:JW2372-MONOMER.

Names & Taxonomyi

Protein namesi
Recommended name:
Protein YfdX
Gene namesi
Name:yfdX
Ordered Locus Names:b2375, JW2372
OrganismiEscherichia coli (strain K12)
Taxonomic identifieri83333 [NCBI]
Taxonomic lineageiBacteriaProteobacteriaGammaproteobacteriaEnterobacteralesEnterobacteriaceaeEscherichia
Proteomesi
  • UP000000318 Componenti: Chromosome
  • UP000000625 Componenti: Chromosome

Organism-specific databases

EcoGeneiEG14146. yfdX.

PTM / Processingi

Molecule processing

Feature keyPosition(s)DescriptionActionsGraphical viewLength
Signal peptidei1 – 211 PublicationAdd BLAST21
ChainiPRO_000001388122 – 211Protein YfdXAdd BLAST190

Proteomic databases

PaxDbiP76520.
PRIDEiP76520.

Expressioni

Inductioni

By EvgA.

Interactioni

Protein-protein interaction databases

BioGridi4260861. 12 interactors.
IntActiP76520. 2 interactors.
STRINGi511145.b2375.

Structurei

3D structure databases

ProteinModelPortaliP76520.
SMRiP76520.
ModBaseiSearch...
MobiDBiSearch...

Family & Domainsi

Keywords - Domaini

Signal

Phylogenomic databases

eggNOGiENOG4108V08. Bacteria.
ENOG4111IX2. LUCA.
HOGENOMiHOG000122901.
OMAiTETQYLM.

Family and domain databases

InterProiIPR021236. Uncharacterised_YfdX.
[Graphical view]
PfamiPF10938. YfdX. 1 hit.
[Graphical view]

Sequencei

Sequence statusi: Complete.

Sequence processingi: The displayed sequence is further processed into a mature form.

P76520-1 [UniParc]FASTAAdd to basket

« Hide

        10         20         30         40         50
MKRLIMATMV TAILASSTVW AADNAPVAAQ QQTQQVQQTQ KTAAAAERIS
60 70 80 90 100
EQGLYAMRDV QVARLALFHG DPEKAKELTN EASALLSDDS TEWAKFAKPG
110 120 130 140 150
KKTNLNDDQY IVINASVGIS ESYVATPEKE AAIKIANEKM AKGDKKGAME
160 170 180 190 200
ELRLAGVGVM ENQYLMPLKQ TRNALADAQK LLDKKQYYEA NLALKGAEDG
210
IIVDSEALFV N
Length:211
Mass (Da):22,977
Last modified:February 1, 1997 - v1
Checksum:iD2750C9E578B2D2E
GO

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75434.1.
AP009048 Genomic DNA. Translation: BAE76705.1.
PIRiD65011.
RefSeqiNP_416876.1. NC_000913.3.
WP_000825600.1. NZ_LN832404.1.

Genome annotation databases

EnsemblBacteriaiAAC75434; AAC75434; b2375.
BAE76705; BAE76705; BAE76705.
GeneIDi949108.
KEGGiecj:JW2372.
eco:b2375.
PATRICi32120129. VBIEscCol129921_2473.

Cross-referencesi

Sequence databases

Select the link destinations:
EMBLi
GenBanki
DDBJi
Links Updated
U00096 Genomic DNA. Translation: AAC75434.1.
AP009048 Genomic DNA. Translation: BAE76705.1.
PIRiD65011.
RefSeqiNP_416876.1. NC_000913.3.
WP_000825600.1. NZ_LN832404.1.

3D structure databases

ProteinModelPortaliP76520.
SMRiP76520.
ModBaseiSearch...
MobiDBiSearch...

Protein-protein interaction databases

BioGridi4260861. 12 interactors.
IntActiP76520. 2 interactors.
STRINGi511145.b2375.

Proteomic databases

PaxDbiP76520.
PRIDEiP76520.

Protocols and materials databases

Structural Biology KnowledgebaseSearch...

Genome annotation databases

EnsemblBacteriaiAAC75434; AAC75434; b2375.
BAE76705; BAE76705; BAE76705.
GeneIDi949108.
KEGGiecj:JW2372.
eco:b2375.
PATRICi32120129. VBIEscCol129921_2473.

Organism-specific databases

EchoBASEiEB3898.
EcoGeneiEG14146. yfdX.

Phylogenomic databases

eggNOGiENOG4108V08. Bacteria.
ENOG4111IX2. LUCA.
HOGENOMiHOG000122901.
OMAiTETQYLM.

Enzyme and pathway databases

BioCyciEcoCyc:G7238-MONOMER.
ECOL316407:JW2372-MONOMER.

Miscellaneous databases

PROiP76520.

Family and domain databases

InterProiIPR021236. Uncharacterised_YfdX.
[Graphical view]
PfamiPF10938. YfdX. 1 hit.
[Graphical view]
ProtoNetiSearch...

Entry informationi

Entry nameiYFDX_ECOLI
AccessioniPrimary (citable) accession number: P76520
Secondary accession number(s): Q2MAK1
Entry historyi
Integrated into UniProtKB/Swiss-Prot: December 1, 2000
Last sequence update: February 1, 1997
Last modified: November 2, 2016
This is version 96 of the entry and version 1 of the sequence. [Complete history]
Entry statusiReviewed (UniProtKB/Swiss-Prot)
Annotation programProkaryotic Protein Annotation Program

Miscellaneousi

Keywords - Technical termi

Complete proteome, Direct protein sequencing, Reference proteome

Documents

  1. Escherichia coli
    Escherichia coli (strain K12): entries and cross-references to EcoGene

Similar proteinsi

Links to similar proteins from the UniProt Reference Clusters (UniRef) at 100%, 90% and 50% sequence identity:
100%UniRef100 combines identical sequences and sub-fragments with 11 or more residues from any organism into one UniRef entry.
90%UniRef90 is built by clustering UniRef100 sequences that have at least 90% sequence identity to, and 80% overlap with, the longest sequence (a.k.a seed sequence).
50%UniRef50 is built by clustering UniRef90 seed sequences that have at least 50% sequence identity to, and 80% overlap with, the longest sequence in the cluster.